Planctomyces sp. SH-PL62: VT85_21940
Help
Entry
VT85_21940 CDS
T04401
Symbol
rlmI_2
Name
(GenBank) Ribosomal RNA large subunit methyltransferase I
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
plh
Planctomyces sp. SH-PL62
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plh03009
]
VT85_21940 (rlmI_2)
Enzymes [BR:
plh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
VT85_21940 (rlmI_2)
Ribosome biogenesis [BR:
plh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VT85_21940 (rlmI_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUA_3
Methyltrans_SAM
Cons_hypoth95
Methyltransf_25
MTS
PrmA
FtsJ
Methyltransf_31
Methyltransf_15
Methyltransf_11
TRM5-TYW2_MTfase
TRM
Spermine_synth
PUA
UPF0020
Motif
Other DBs
NCBI-ProteinID:
AMV40110
UniProt:
A0A142YML9
LinkDB
All DBs
Position
5565798..5567120
Genome browser
AA seq
440 aa
AA seq
DB search
MSQPRPRNPRGPEPPPPPMPIPDRSLDPEIPLPTVAIRSPGNHPFIFRKMIEGVKGPLIA
RLGDLVQVLDRDGNPLGYGLWNPRSQISLRMLSREPQAPGVDFWTRRIDEAVKLRLDMLR
VESDSNAYRVIHAEGDGLSGLIVDRYDDVLSVEVFSLGMYQRIGPILDLLAKRLGTKHFR
VRVDERVALQEDFAGRPVVSPQLPPRVTVTEHGVRYRIHFAESHKTGFFCDQRDNRRELA
KFCKDRTVLDACCYTGGFGLNALIRGEAREVTCIDLDEKAVALAKENGNANSVRLDVVHA
DAFGYMRQMGLNGREYGAIILDPPKLIMDRDDVAPGKRKYFDLNVLAMSLVEPGGLLLTC
SCSGLLDAAEFQGLLKAASRKANRSVQLLAMTGASADHPVALDAPEGSYLKAAWLRMGER
LPEPISSPPSADFSTISPTD
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcctcgaccgaggaacccccgagggcccgagccccccccgccgccgatgccg
atcccggaccggtccctggaccccgagatcccgctgccgaccgtcgcgatccggtctccg
ggcaatcatccgttcatcttccggaagatgatcgagggggtgaaaggaccgctcatcgcc
cggctgggcgacctcgtccaggtgctcgaccgagacggcaacccgctcggctacgggctc
tggaacccccgctcgcagatcagcctgcggatgctctcacgcgagccccaggcgccgggc
gtggacttctggacgcggcggatcgacgaggcggtcaagctccggctcgacatgctccgc
gtggaatccgattccaacgcctaccgcgtcatccacgccgagggagacggcctctccggc
ctgatcgtcgaccgctacgacgacgtgctctcggtcgaggtcttcagcctgggcatgtac
cagcggatcgggccgatcctcgaccttctggccaaacggctggggacgaagcacttccgc
gtccgcgtcgacgagcgcgtcgccttgcaggaagacttcgccggccgccccgtggtcagc
ccccagctccccccccgggtgacggtgacggagcacggcgtccgctaccgcatccacttc
gcggagagccacaagaccggcttcttctgcgaccagcgggacaaccggcgggagcttgcg
aagttctgcaaggaccgcaccgtcctggacgcctgctgctacaccggcggcttcggcctc
aacgccctgatccggggcgaggcgcgcgaggtcacctgcatcgacctggacgagaaggcc
gtcgcgctggccaaggagaacggcaacgccaacagcgtccggctcgacgtggtccacgcc
gacgccttcggctacatgcggcagatgggcctcaacggccgcgagtacggcgcgatcatc
ctggacccccccaagctgatcatggatcgcgacgacgtcgcgcccgggaagcggaagtac
ttcgacctcaacgtcctggcgatgagcctcgtcgagcccggcgggcttttgctcacctgc
tcgtgctccggcctgctggacgcggccgagttccaggggctcctcaaggcggcctcccgg
aaggccaaccggagcgtccagcttctggcgatgaccggcgcctcggccgaccacccggtc
gcgctggacgcccccgaaggctcctacctgaaggcggcctggctccgcatgggcgagcgg
ctccccgagccgatctcctccccgccgtcggccgacttttcgacaatctccccgaccgac
tga
DBGET
integrated database retrieval system
