Planctomyces sp. SH-PL62: VT85_23045
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Entry
VT85_23045 CDS
T04401
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
plh
Planctomyces sp. SH-PL62
Pathway
plh02020
Two-component system
plh02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VT85_23045 (fliA)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
VT85_23045 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plh03021
]
VT85_23045 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
plh02035
]
VT85_23045 (fliA)
Transcription machinery [BR:
plh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VT85_23045 (fliA)
Bacterial motility proteins [BR:
plh02035
]
Flagellar system
Flagellar assembly proteins
Stator
VT85_23045 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
MarR_2
PCI
HTH_23
HTH_20
GerE
Motif
Other DBs
NCBI-ProteinID:
AMV40327
UniProt:
A0A142YM74
LinkDB
All DBs
Position
complement(5799557..5800333)
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AA seq
258 aa
AA seq
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MSTKVDVDVTELWREFKEQPTTEMRNQLVERYLALVKYNAERIWQRLPEGVDLDDLISAG
VFGLMDAIDAFDLTRGVKFETYCVPRIRGAMLDELRTMDWVPRLVRSKATKMEEARKELE
ARHGRPPTPAELAERLGLPMEEFEKMASDANAVGLISLNKKWYETDSYKDVREIDILEDK
KGEDPTRRLQRKDLMRMVTKGLNRNERLIIILYYYEELTMKEIGATLDLSESRVSQMHSS
IIQRLQSQLSLRRPEFGT
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccaaagtggatgtggatgtgacggaactctggcgggagttcaaggaacagccc
accacggagatgcggaaccagttggtcgagcgctacttggccctggtcaagtacaacgcg
gaacgcatctggcagcgcctccccgagggggtcgacctcgacgacttgatctcggcgggc
gtcttcggcctgatggacgcgatcgacgccttcgacctgacgcgcggcgtcaagttcgag
acctactgcgtcccgcggatccggggggccatgctcgacgagctgcggaccatggactgg
gtgcccaggctggtccgctccaaggccaccaagatggaagaggctcgcaaggagctggag
gccaggcacggccgacctcccacccccgccgagctggccgagcgactcggcctgccgatg
gaggagttcgagaagatggcgtccgacgccaacgccgtcggcctcatcagcctcaacaag
aagtggtacgagaccgacagctacaaggacgtccgcgagatcgacatcctcgaggacaag
aagggggaggaccccacccgtcggctccagcgcaaagacctgatgcgcatggtgacgaag
gggctcaaccgcaacgaacgcctcatcatcatcctctactattatgaggaactgacgatg
aaggagatcggcgcgacgctcgacctgagcgaatcccgcgtctcgcagatgcactcgtcg
atcatccagcggctccagtcgcagctctccctacgccgccccgaattcgggacctga
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