Planctomyces sp. SH-PL62: VT85_23265
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Entry
VT85_23265 CDS
T04401
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
plh
Planctomyces sp. SH-PL62
Pathway
plh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VT85_23265
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_13
Motif
Other DBs
NCBI-ProteinID:
AMV40370
UniProt:
A0A142YNC3
LinkDB
All DBs
Position
5855165..5859166
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AA seq
1333 aa
AA seq
DB search
MIPTTTRTAGPRMLWGMWGKAEGPGRRKRRLRGETLRSLEGLEGRTMLAASINIDPVGVL
TYDTDGATAETLTISVVGNIYTFASTETINVVSNSPGLPVTNDGTTTVTVQGILGLQVDA
NGQSDRITVASTNVATGVTLQNSDAVVTLGSAATPTGLGTLTAAITVSETGVVTGNAVVL
DDTGMAFSIPTAYVLTATTVSRAGFGGLTYSGVDELTLKGASAGFGGQNSYTVSGTADDV
ATRLDDSANQGLGTYNVGGTSAVKNATTSLRLDAGGGAGDDVFNVAAASSAVDLWAGGGP
TSLNLTDAGSASGVTGAVTLHNGAGAPFAVTVDHSAGTAGGAWKLGVASALARLTGFSAG
GSLAYDPAEIQALTLRNAAGTANSLEVDFGPTNPLPAGSTTYDGGWTSSSGAKSDLILLG
DPEAAIAYEIHSPSGTGAGLLQFVDEDSAATSISYSGLSPHSLYDTVPATTYTFNYLGDP
NDGVRISDGENSAATGNVQTLKIASDGAIPAFVDTHVANKTNVVVNQNLAPGDYSITVDY
AIAAPVAGLSTLTMASGSGDDDADLLALPAGAATVLLQGGGDDTASLALVGASAAASTSL
DGGAGTDSLVVDAGGLAVTAANFAAGPGGATTITGAPITGGPITYRRYESVVVTDVGPIT
PTVYSVPIHAVQGQRLVDALVGAFTAPATARASDFVATIAWGDGSTSAGVIVQDASTPSI
FYVYGTHTFYQDAPALATAITVRSLGSTSTTSIGGVPVTIIAPAGSPVTTAGTASVDNAP
INVVVRGFSGFENIPIASSPSIVVATFTDLGGVAPTDANPAGNYTATIYWGDGSSGVGGL
TIVRNGTSNSFIVTAAPHTYDTPRSYVVTVVVRDAETSAVVGIGSGSASIADAPLTATAS
QPTNTSILEGYRFVDWVVGSFNDANPLARTDQFAVTIDWGDGSPTSSSRVIQPGGVGTTF
YVIGSHTYADALAPGAHPATVGAGPVFGPVTQDGVFLVTMTVRDTFGSAANLYNELTVAD
RLLTVSGALDSASDTGASNSDGVTSDSTPTFSGRASEGNAVVYLYGSPGGAPFLIGSTTA
DATGAWSITPAAALADGDYLIQAQAYDARGHTISALTVIQAVVVDTVGPKVADLLFDNFR
GQVIATFQDFGGASNAGVGLNLATVRDANNYRFSALLASHPNLRRWLVTSIDVTPGTTVG
EQVATVRFNDGAGIRGGRYLFTARSVDPSNLSGVQDNAGNALDGEFYGTFPSGNNVNGGD
FEARLDAIHHTIFPARTQVGTATPVTPPGRPATGRFLRLDGTLLPSARTAVRLASARATP
GAARLARLERLGS
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atgatcccgacgacgacgcggacggccggccctcggatgctgtgggggatgtggggcaaa
gccgagggaccaggccgtcgcaagcgtcgtcttcgcggcgagacgctcaggagcctcgag
ggcctggaaggccgcacgatgctggcggcctcgatcaacatcgatcccgtcggcgtcctg
acctacgacaccgacggggcgacggcggagacgctgacgatctcggtcgtcgggaacatc
tacacgttcgcctcgaccgagacgatcaacgtggtcagcaactccccggggctccccgtc
accaacgacggcacgacgacggtgacggtccaggggatcctcgggctccaggtagacgcg
aacggccaatccgaccggatcaccgtggcgagcaccaacgtcgcgacgggcgtcacgctg
caaaacagcgacgccgtcgtcaccctgggctccgcggcgacccccaccggcctcgggacg
ttgaccgccgcgatcacggtctccgagacgggggtggtgacgggcaacgccgtggtgctg
gacgacaccggcatggccttctcgatccccaccgcgtacgtcctgaccgccacgaccgtg
tcgcgggccgggttcggcggcctgacctattcgggcgtcgacgagctgacgctcaagggg
gcctcggcgggcttcggggggcagaattcctacacggtgagcggcaccgccgacgacgtg
gcgacccggctcgacgactcggcgaaccagggcctggggacctacaacgtcggcggcacc
tcggccgtcaagaacgcgacgaccagcctgcggctcgacgccggcggcggcgccggcgac
gacgtcttcaacgtcgcggccgcctcctcggccgtggacctctgggccggcggcggcccg
accagcctgaacctgaccgacgccggctcagcctcgggcgtgaccggggcggtcacgctc
cacaatggcgcaggagcgccgttcgccgtgacggtcgaccactcggccgggacggccggc
ggtgcctggaagctgggggtcgcctcggccctcgcccggttgacgggcttcagcgccggc
ggctcgctcgcctacgaccccgccgagatccaggcgctgacgctccgcaacgccgcgggg
acggccaactcgctggaagtcgatttcggcccgaccaaccccctgcccgccggctcgacg
acctacgacggcggctggaccagctcgtcgggggccaagagcgacctcatcctcctcggc
gaccccgaggcggccatcgcctatgagatccattcgccctcggggaccggcgccggcctg
ctccagttcgtcgacgaggactccgccgccacgtcgatctcctactccgggctctccccg
cacagcctctatgacacggtcccggcgacgacctacacgttcaattacctgggcgacccg
aacgacggcgtgaggatcagcgacggcgagaactcggccgcgacggggaacgtgcagacg
ctcaagatcgcgtcggacggggcgatccccgcgttcgtcgacacccatgtcgcgaacaag
acgaacgtcgtggtcaaccagaacctcgccccgggcgactactccatcacggtggattac
gcgatcgccgcccccgtcgccgggctctcgacgctgacgatggcctcgggttccggtgac
gacgacgccgaccttctcgccctccccgccggcgccgcgaccgtcctgctgcaaggcggc
ggcgacgacacggcctctctggccctcgtcggcgcgtcggccgcggcctcgacctcgctc
gacggcggcgcggggaccgactccctggtcgtcgacgccggcggcctggccgtcacggcg
gcgaacttcgcggccggtcccggcggcgcgaccaccatcaccggcgcgcccatcaccggc
ggacccatcacgtatcgccgctatgagagcgtcgtcgtcaccgacgtcggcccgatcacg
ccgaccgtctacagcgtcccgatccacgcggtccagggccagcgcctggtcgacgcgctg
gtcggcgccttcacggccccggcgaccgctcgggcgtccgacttcgtcgcgacgatcgcc
tggggcgacggctcgacgtcggccggcgtgatcgtccaggacgcctcgaccccgtcgatc
ttctacgtctacgggacgcacacgttctatcaggacgccccggccctggcgaccgcgatc
accgtccggtcgctcggctccacgagcacgacgagcatcggcggcgtgccggtgacgatc
atcgccccggccggctccccggtcaccacggcggggaccgcctcggtcgacaacgcgccc
atcaacgtcgtcgtccgcggcttctcgggcttcgagaacatcccgatcgcctcctcgccg
tcgatcgtcgtggcgaccttcaccgacctcgggggcgtcgccccgaccgacgcgaatccg
gccgggaactacaccgccaccatctactggggcgacggctcgtcgggcgtcggcggcctg
acgatcgtccggaacgggacgtccaacagcttcatcgtgacggccgccccgcacacctac
gacacgccgaggagctacgtcgtcaccgtcgtggtgagggacgccgagacgtcggccgtg
gtggggatcggcagcggctcggcgtcgatcgccgacgcgccgctgacggcgacggcctcg
cagccgacgaacacgagcatcctggaaggctatcggttcgtcgactgggtcgtcggctcg
ttcaacgacgccaacccgctggcgaggaccgaccagttcgcggtcaccatcgactggggc
gacggctcgccgacctcgtccagccgggtgatccagccggggggcgtggggacgacgttc
tacgtcatcggcagccacacctacgccgacgcgctcgccccgggggcccaccccgccacg
gtcggcgccgggccggtcttcggccccgtcacccaggacggcgtcttcctcgtgacgatg
acggtccgggatacgttcggctcggccgccaacctctacaacgagctgacggtcgccgac
cggctcctgacggtctccggcgcgctggactcggcctcggacaccggggcctcgaattcc
gacggcgtgaccagcgactccacgccgacgttcagcgggagggccagcgaggggaacgcg
gtcgtctacctgtacggctcgcccggcggcgcgccgttcctgatcggatcgaccacggcc
gacgccaccggcgcctggagcatcaccccggccgcggccctggccgacggcgactacctg
atccaggcgcaggcgtacgacgcccgggggcacaccatcagcgccctcacggtcatccag
gcggtggtcgtcgacaccgtcggccccaaggtcgcggacctgctgttcgacaacttccgc
ggccaggtgatcgccacgttccaggacttcggcggcgcgtcgaacgccggtgtgggcctg
aacctggcgaccgtccgggacgcgaacaactaccggttctccgcgctgctggcgtcccac
ccgaatctgcggcgctggctggtcacgtcgatcgatgtgacgcccggcacgaccgtgggc
gagcaggtcgccacggtgcggttcaacgacggcgcgggcatccgggggggacgctacctg
ttcaccgcccggtcggtcgacccgtcgaacctgtcgggcgtgcaggacaacgccggcaac
gccctggacggcgagttctacggcaccttcccgtcgggcaacaacgtcaacggcggcgac
ttcgaggcgaggctcgacgccatccaccacacgatcttccccgccaggacccaggtcggg
acggccaccccggtcacgcctccgggccgcccggcgacgggccgattcctccggctcgac
ggcaccctgcttccctcggcccgcacggcggttagactggcttcggcccgcgcgacgccg
ggggcggcccgcctcgcccggctcgaacggctcggctcctga
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