KEGG   Planctomyces sp. SH-PL62: VT85_24355
Entry
VT85_24355        CDS       T04401                                 
Symbol
nrdJ
Name
(GenBank) Vitamin B12-dependent ribonucleotide reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
plh  Planctomyces sp. SH-PL62
Pathway
plh00230  Purine metabolism
plh00240  Pyrimidine metabolism
plh01100  Metabolic pathways
plh01232  Nucleotide metabolism
Module
plh_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
Brite
KEGG Orthology (KO) [BR:plh00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    VT85_24355 (nrdJ)
   00240 Pyrimidine metabolism
    VT85_24355 (nrdJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:plh03400]
    VT85_24355 (nrdJ)
Enzymes [BR:plh01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     VT85_24355 (nrdJ)
DNA repair and recombination proteins [BR:plh03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    VT85_24355 (nrdJ)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TSCPD
Other DBs
NCBI-ProteinID: AMV40585
LinkDB
Position
complement(6134343..6137309)
AA seq 988 aa
MVVPRVFSTEGVSPYDQVEWDSRSAAIKDERGRAIFEQLDCEIPKAWSQLATNVVVSKYF
YGDVSGGNGSPAEGKREYSVRQLVDRVTRTIADWGREDGYFATPEDSERFYDELSALCLN
QYGSFNSPVWFNVGLFHAYGIAGPANNWRWDEETRTVVAASNAYETPQSSACFIQSVSDD
MDGIMRLAHSEAMLFKFGSGTGTDLSTLRSSREKLAGGGTPSGPVSFMRVYDAVAGVVKS
GGKTRRAAKMQTLKCWHPDILDFIECKIKEEAKAQALIQQGYEANFNGDAYSSVLFQNAN
LSVRCSDAFLDAAENDGEWTTTAVLSGRPVDTYKAEMLLDRIAEGTWLCGDPGMQYEDTI
QRWHTCPNTAPINSSNPCSEYMFVDDSACNLASLNLVRFVDADGAFDVERFRAAVRVFIT
AQEILVDHASYPTQKIAANSHKFRPLGLGFANLGSLLMSSGLPYDSDEGRAVAAAITAVM
HGQSYLTSAEHAGRVGPFDGFAINREPMLHVMEMHREAAYALDEAAPEAVRSAAHRIWDE
CLEVGRANGFRNSQVTVLAPTGTIAFMMDCDTTGIEPDIALVKYKLLAGGGMLKIVNQTV
PASLRKLGYDEPEIRGMLDYIDAHDTIEGAPSLKDEHLPVFDCAFAPPQGGRSIHYRGHL
RMMAAVQPFLSGAISKTCNLPNEATVEDIRNTYLEGWKLGLKALAIYRDGSKGSQPVSTK
SEKGEADKAAAAAAVVPEPAPIAVESLKPVQTTSPATVATKPRRERLPHTRRSITHKFDI
QGHEGYINVGFYPDGRPGELFITMAKEGSTIGGLMDVLGTSISIGLQYGVPLEVFVNKFA
HSRFEPAGFTKNPDIPIAKSIADYIFRWLGMEFISGYREANSPNRGAEEPAAQTVVEAVG
SSTPVLKVNGHRSATIADLEHAEAVLGAAPGKQPATLPQSIQPELAIQDRQFASFQSDAP
ACDNCGALTVRCGTCYRCFNCGNSMGCS
NT seq 2967 nt   +upstreamnt  +downstreamnt
atggtggttcctcgcgtgttcagcaccgagggggtgagcccgtacgatcaggtggagtgg
gactcccggtcggcggccatcaaggacgagcgggggcgggcgatcttcgagcagctggac
tgcgagatccccaaggcctggagtcagctcgcgaccaacgtcgtggtcagcaagtacttc
tacggcgacgtctccggcggcaacggctcgcccgccgaggggaagcgcgagtactcggtc
cgccaactcgtcgaccgcgtcacccggacgatcgccgactggggccgcgaggacggctac
ttcgcgacgccggaagactcggagcggttctacgacgagctttccgcgctctgcctgaac
cagtacgggtcgttcaactccccggtctggttcaacgtcggcctgttccacgcctacggg
atcgccggcccggccaacaactggcgctgggacgaggagacccggacggtcgtcgccgcg
tccaacgcgtatgagacgccccagtcctcggcctgcttcatccagagcgtctccgacgac
atggacggcatcatgcggctcgcgcacagcgaggccatgctgttcaagttcggctccggg
accggcaccgacctgtcgacgcttcggtccagccgcgagaagctcgccggcggcggcacg
ccctcggggccggtcagcttcatgcgggtgtacgacgctgtcgccggcgtggtgaagtcg
gggggcaagacccgtcgcgccgccaagatgcagaccctgaagtgctggcacccggacatc
ctcgatttcatcgagtgcaagatcaaggaggaggccaaggcgcaagccctgatccagcag
gggtatgaggcgaacttcaacggcgacgcctatagctccgtcctgttccagaacgccaac
ctctcggtccgctgctccgacgccttcctggacgccgccgagaacgacggcgagtggacc
accacggcggtcctctcgggacggccggtggacacctacaaggccgagatgctgctggat
cggatcgccgaggggacctggctctgcggcgaccccggcatgcagtacgaagacacgatc
cagcgctggcacacctgcccgaacacggcgccgatcaactcctcgaacccgtgcagcgag
tacatgttcgtcgacgattcggcgtgcaacctggcctcgctgaacctggtccggttcgtg
gacgcggacggtgcgttcgacgtggagcggttccgcgcggcggtgcgggtcttcatcacg
gcgcaggagatcctggtcgaccacgccagctatcccacgcagaagatcgccgccaacagc
cacaagttccgccccctggggttgggcttcgccaacctgggaagcctcctgatgtcgtcg
ggcctgccgtacgactccgatgagggccgggcggtggccgcggcgatcacggccgtcatg
cacggccagtcctacctgaccagcgccgagcacgccggccgggtcgggccgttcgacggc
ttcgcgatcaaccgcgagccgatgctccatgtcatggagatgcaccgcgaggcggcctac
gccctcgacgaggcggcccccgaggccgtccggtcggccgcgcaccggatctgggacgag
tgcctggaggtcggccgcgccaacggtttccgcaacagccaggtgacggtgctggcgccc
acgggcaccatcgccttcatgatggactgcgacaccaccggcatcgagcccgacatcgcc
ctggtcaagtacaagctgctggccggcggcggcatgctcaagatcgtcaaccagacggtc
cccgcctcgctccgcaagctcggctacgacgagcccgagatccgcgggatgctggactac
atcgacgcccacgacaccatcgagggcgcccccagcctgaaggacgagcacctgcccgtc
ttcgactgcgccttcgccccgccccaggggggccggagcatccactaccggggccacctg
cggatgatggcggcggtccagccgttcctctcgggtgcgatctccaagacgtgcaacctg
ccgaacgaggcgaccgtcgaggatatccgcaacacctacctggaaggctggaagctcggc
ctcaaggccctggcgatctaccgcgacggctccaaggggagccagccggtctcgaccaag
tccgagaagggcgaggccgacaaggccgcggcggccgcggccgtcgtccccgaaccggcc
ccgatcgcggtcgagtcgctgaagcccgtgcagacgacctcgccggcgacggtcgccacc
aagccccggcgcgagcggttgccgcacacccggcggagcatcacgcacaagttcgacatc
caggggcatgagggctacatcaacgtcggcttctaccccgacggccgccccggcgagctg
ttcatcacgatggccaaggaaggctcgaccatcggcggcctgatggacgtgctggggacc
tcgatctcgatcggcctgcaatacggcgtgccgctcgaggtcttcgtcaacaagttcgcc
cacagccggttcgagcccgccgggttcaccaagaacccggacatcccgatcgccaagagc
atcgccgactacatcttccgctggctcggcatggagttcatctccggctaccgcgaggcc
aactccccgaaccgaggggccgaggagcccgcggcccagacggtcgtcgaggccgtcggg
tcgtccacccccgtcctcaaggtcaacggccaccgctcggccacgatcgccgacctcgag
cacgccgaggccgtcctgggcgccgcgccgggcaagcagccggcgacgctgccccagtcg
atccagccggagctggccatccaggaccgccagttcgcctcgttccagagcgacgccccg
gcctgcgacaattgcggtgccctgaccgtccgctgcgggacctgctaccgctgcttcaac
tgcggcaacagcatgggctgctcctga

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