Planctomyces sp. SH-PL62: VT85_25275
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Entry
VT85_25275 CDS
T04401
Symbol
gyrA_2
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
plh
Planctomyces sp. SH-PL62
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plh03032
]
VT85_25275 (gyrA_2)
03400 DNA repair and recombination proteins [BR:
plh03400
]
VT85_25275 (gyrA_2)
Enzymes [BR:
plh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
VT85_25275 (gyrA_2)
DNA replication proteins [BR:
plh03032
]
Prokaryotic type
DNA Topoisomerases
VT85_25275 (gyrA_2)
DNA repair and recombination proteins [BR:
plh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VT85_25275 (gyrA_2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AMV40769
UniProt:
A0A142YNK4
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All DBs
Position
6398481..6401168
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AA seq
895 aa
AA seq
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MSTAELPPNAPLAPLPLDIEEELKESYLNYAMSVIISRALPDVRDGLKPSQRRILVAMRD
LGLTPGSSTSKCAGIVGETMKRYHPHGDNSIYPTLARMAQWWNMRHLLITGQGNFGSIHG
LPPAAMRYTEAKLSPVAAEMLEDINYDTVDFQPNYDEKYQEPRVLPGKFPNLLVNGSGGI
AVGMATSIPPHNLGEVCDAVLAYIDDPAIGLDEIMEHLPAPDFPTGGVICGRMGVKEAYR
SGRGRVILRATSTIEELKDGRSQIVFSDIPYQLTKEPLFKKLAELINNGRITGVSDIVDE
SDRKQPVRIVVKLKKAEDPNVILNQLYEFSPLQDTFSVIMLALVDGRPKTLPIKEFLRLF
VDHRINVIRRRTRYLLRQARQRAHIVEGLLIALHHIDEIIRVIRSSANPAEARVRLMTME
VSAQILQRALDDPDAKQSASLTRMQADAILAMQLQRLTGLEADKLAAEYLGLKADIDRYE
AILGDEQIILGLIRDDLLELKSKYANPRRSTISDEELGNYDKEALIREEYMVVTVTHDGY
IKRQPPSTYRAQGRGGRGITAANTREGDFLEHMFVALTHDYLLFFTDHGKVFWLKVYDLP
IATRTSGGRAIVNLLQVSEGEKITGIVPVRKFRDDESLMMVTRRGTVKKTELTAFRRPLG
RGIIALGLDEGDQLIGVARTKVGDQVILSTREGMAVRFDESCVRSMGRPAHGVRGINLEE
GDEVVGMIVANGQEDPASLLTVCENGFGKRTLLSEYRSQNRGGKGLIDIKTSDRNGRVVA
ISKVTDADEVMITTTGGILIRTRVGDTRPIGRNTQGVRLIRLDEGDAVSSLAKLPEEELG
GDEAVLDVLDHGEGAPLPTNGHILDDGVAEAEAQDHPEIEDESTDDGSTEEESGE
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaccgccgaactgccgccgaacgcgccgctcgctcccctgccgctggacatcgag
gaggagctgaaggaaagctacctcaattacgcgatgtcggtcatcatcagccgggcgttg
ccggacgtccgcgacgggttgaagccgtcgcagcggcggatcctggtcgccatgcgggac
ctggggctgaccccggggagctccaccagcaagtgcgcgggcatcgtcggcgagacgatg
aagcggtaccacccccacggcgacaactccatctatcccaccctggcccgcatggcccag
tggtggaacatgcggcacctgctgatcaccgggcaggggaacttcggcagcatccacggc
ctgccgccggccgccatgcggtacaccgaggcgaagctgagcccggtcgccgccgagatg
ctggaagacatcaactacgacacggtcgacttccagcccaactacgacgagaagtaccag
gagccgcgggtcctgccgggcaagttcccgaacctgctggtcaacggctccgggggcatc
gccgtcggcatggcgacgtcgatcccgccgcacaacctgggcgaggtctgcgacgcggtg
ctggcctacatcgacgacccggccatcgggctcgacgagatcatggagcacctccccgcg
cccgacttcccgaccgggggggtcatctgcggccggatgggggtgaaggaggcgtatcgc
agcggccggggccgggtgatcctccgcgccacgtcgaccatcgaggagctgaaggacggc
cgctcccagatcgtcttctccgacatcccctaccagctcaccaaggagccgcttttcaag
aagctggccgagctgatcaacaacggccggatcaccggcgtctccgacatcgtcgacgag
agcgaccgcaagcagccggtgcggatcgtcgtgaagctgaagaaggcggaagaccccaac
gtcatcctgaaccagctctacgagttctcgccgctgcaagacaccttcagcgtcatcatg
ctggccctggtggacggccgccccaagacgctgccgatcaaggagttcctccggctcttc
gtcgaccaccggatcaacgtcatccgccgccgcacccgatacctgctccgccaggcgagg
cagcgggcgcacatcgtcgaaggcctgctgatcgcgctgcaccacatcgacgagatcatc
cgcgtgatccggtcgtcggccaacccggccgaggcccgcgtgcggttgatgacgatggag
gtctccgcccagatcctccagcgcgccctcgacgatcccgacgccaagcagtccgccagc
ctcacccgaatgcaggccgacgccatcctggccatgcagctccagcggctcaccggcctg
gaggccgacaagctggcggccgagtacctgggcctcaaggccgacatcgaccgctacgag
gccatcctcggcgacgagcagatcatcctcggcctcatccgcgacgacctgctggagctg
aagtcgaagtacgccaacccccgccggagcaccatctccgacgaggagctgggcaactac
gacaaggaagccctgatccgcgaggagtacatggtggtgaccgtcacccacgacggttac
atcaagcgccagccccccagcacctatcgcgcccagggtcgcggcgggcgcggcatcacc
gccgccaacacccgcgagggggactttctcgaacatatgttcgtcgccctcacgcacgac
tatctgctcttcttcaccgaccacggcaaggtcttctggctgaaggtctacgacctgccg
atcgccaccaggacctcgggcggacgcgcgatcgtcaacctgctgcaggtctccgagggg
gagaagatcaccggcatcgtccccgtccgcaagttccgcgacgacgagtcgctgatgatg
gtcacccgccgggggaccgtcaagaagaccgagctgaccgccttccgacgccccctgggc
cggggcatcatcgccctggggctcgacgaaggggaccagttgatcggcgtcgcccggacc
aaggtcggcgaccaggtgatcctcagcacccgcgaggggatggccgtccggttcgacgaa
tcgtgcgtccgctcgatggggcgccccgcgcacggcgtccggggtatcaatctggaagag
ggcgacgaggtcgtcggcatgatcgtcgccaacggccaggaagaccccgccagcctgctg
acggtctgcgagaacggcttcggcaagcggaccctcctctccgagtaccgctcgcagaac
cgaggcggcaagggcctgatcgacatcaagaccagcgaccgcaacggccgggtcgtcgcc
atcagcaaggtgaccgacgccgacgaggtcatgatcaccaccaccggcggcatcctgatc
cggacccgcgtgggcgacacccgccccatcggccgcaacacccagggcgtccgcctgatc
cgcctcgacgaaggagacgccgtcagcagcctcgccaagctccccgaggaggaactcggc
ggcgacgaggccgtcctcgacgtcctcgaccacggcgaaggcgcccccctccccaccaac
ggccacatcctcgacgacggcgtcgccgaggccgaagcccaggaccacccggaaatcgag
gacgagtcgaccgacgacgggtcgaccgaggaagagtcgggagagtga
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