KEGG   Planctomyces sp. SH-PL62: VT85_25315
Entry
VT85_25315        CDS       T04401                                 
Symbol
rfbB_2
Name
(GenBank) dTDP-glucose 4,6-dehydratase
  KO
K01710  dTDP-glucose 4,6-dehydratase [EC:4.2.1.46]
Organism
plh  Planctomyces sp. SH-PL62
Pathway
plh00521  Streptomycin biosynthesis
plh00523  Polyketide sugar unit biosynthesis
plh00525  Acarbose and validamycin biosynthesis
plh00541  Biosynthesis of various nucleotide sugars
plh01100  Metabolic pathways
plh01110  Biosynthesis of secondary metabolites
plh01250  Biosynthesis of nucleotide sugars
Module
plh_M00793  dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:plh00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    VT85_25315 (rfbB_2)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    VT85_25315 (rfbB_2)
   01055 Biosynthesis of vancomycin group antibiotics
    VT85_25315 (rfbB_2)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    VT85_25315 (rfbB_2)
   00525 Acarbose and validamycin biosynthesis
    VT85_25315 (rfbB_2)
Enzymes [BR:plh01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.46  dTDP-glucose 4,6-dehydratase
     VT85_25315 (rfbB_2)
SSDB
Motif
Pfam: GDP_Man_Dehyd Epimerase 3Beta_HSD Polysacc_synt_2 RmlD_sub_bind NAD_binding_4 NAD_binding_10 NmrA
Other DBs
NCBI-ProteinID: AMV40777
LinkDB
Position
6408553..6409563
AA seq 336 aa
MGSSFKRILATGGCGFIGSNFVRLQLEQHPDVAITNLDALTYAGNPDNLADLAGDSRYTF
VHGDIADRPFVTRLIAEGGFDAVVHFAAESHVDRSIDDATPFLRTNVIGTQNLLDAARAA
RVGRFVHVSTDEVYGTLGPKDPAFTEETPLTPNSPYSASKAGSDLLVRAAFHTHGMDVVT
TRCSNNYGPYQFPEKLIPLFITNALADVPVPVYGDGMQVRDWIHVMDHCRGVDAALRNGK
AGEVYNFGGLSERFNMDVTRAVLRLTGKTEALIKYVTDRLGHDRRYAVDCSKSERELGWK
PTVTFEQGLEETVAWYKANAAWVDRVKSGAYRNQDA
NT seq 1011 nt   +upstreamnt  +downstreamnt
atgggctcttcgttcaagcggatcctcgcgaccggcggctgcgggttcatcgggtccaac
ttcgtcaggctgcaacttgagcagcatccagatgttgcgatcaccaatctggacgccctg
acctacgcgggcaacccggacaacctggccgatctggcgggcgactcgcggtacacgttc
gtccacggcgacatcgccgaccggccgttcgtgacccggctgatcgccgaggggggcttc
gacgcggtcgtccatttcgcggccgagagccacgtcgaccgctcgatcgacgacgccacg
ccgttcctgcggacgaacgtgatcggcacccagaacctcctggacgccgcccgcgcggcc
agggtgggccggttcgtccacgtctccaccgacgaggtctacggcaccctcggccccaag
gacccggcgttcaccgaggagaccccgctcacgcccaacagcccgtactcggcgagcaag
gcgggctccgacctgctcgtccgcgccgcgttccacacccacgggatggacgtggtgacg
acccggtgctcgaacaactacgggccctaccagttccccgagaagctgatcccgctgttc
atcaccaacgccctggccgacgtccccgtcccggtctacggcgacggcatgcaggtccgc
gactggatccacgtgatggaccactgccggggcgtcgacgccgccctgcggaacgggaag
gccggcgaggtctacaacttcggcggcctgagcgagcggttcaacatggacgtcacccgc
gccgtcttgcggctcaccgggaagaccgaggccctcatcaagtacgtcaccgaccggctc
ggccacgaccgccgctacgccgtcgactgctccaagtcggagcgcgagctgggctggaag
ccgaccgtcaccttcgagcaagggctggaagagaccgtcgcctggtacaaggccaacgcc
gcctgggtcgaccgggtgaagtccggcgcgtaccgcaaccaggacgcctga

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