Planctomyces sp. SH-PL62: VT85_25315
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Entry
VT85_25315 CDS
T04401
Symbol
rfbB_2
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
plh
Planctomyces sp. SH-PL62
Pathway
plh00521
Streptomycin biosynthesis
plh00523
Polyketide sugar unit biosynthesis
plh00525
Acarbose and validamycin biosynthesis
plh00541
Biosynthesis of various nucleotide sugars
plh01100
Metabolic pathways
plh01110
Biosynthesis of secondary metabolites
plh01250
Biosynthesis of nucleotide sugars
Module
plh_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
VT85_25315 (rfbB_2)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
VT85_25315 (rfbB_2)
01055 Biosynthesis of vancomycin group antibiotics
VT85_25315 (rfbB_2)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
VT85_25315 (rfbB_2)
00525 Acarbose and validamycin biosynthesis
VT85_25315 (rfbB_2)
Enzymes [BR:
plh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
VT85_25315 (rfbB_2)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-ProteinID:
AMV40777
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All DBs
Position
6408553..6409563
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AA seq
336 aa
AA seq
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MGSSFKRILATGGCGFIGSNFVRLQLEQHPDVAITNLDALTYAGNPDNLADLAGDSRYTF
VHGDIADRPFVTRLIAEGGFDAVVHFAAESHVDRSIDDATPFLRTNVIGTQNLLDAARAA
RVGRFVHVSTDEVYGTLGPKDPAFTEETPLTPNSPYSASKAGSDLLVRAAFHTHGMDVVT
TRCSNNYGPYQFPEKLIPLFITNALADVPVPVYGDGMQVRDWIHVMDHCRGVDAALRNGK
AGEVYNFGGLSERFNMDVTRAVLRLTGKTEALIKYVTDRLGHDRRYAVDCSKSERELGWK
PTVTFEQGLEETVAWYKANAAWVDRVKSGAYRNQDA
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgggctcttcgttcaagcggatcctcgcgaccggcggctgcgggttcatcgggtccaac
ttcgtcaggctgcaacttgagcagcatccagatgttgcgatcaccaatctggacgccctg
acctacgcgggcaacccggacaacctggccgatctggcgggcgactcgcggtacacgttc
gtccacggcgacatcgccgaccggccgttcgtgacccggctgatcgccgaggggggcttc
gacgcggtcgtccatttcgcggccgagagccacgtcgaccgctcgatcgacgacgccacg
ccgttcctgcggacgaacgtgatcggcacccagaacctcctggacgccgcccgcgcggcc
agggtgggccggttcgtccacgtctccaccgacgaggtctacggcaccctcggccccaag
gacccggcgttcaccgaggagaccccgctcacgcccaacagcccgtactcggcgagcaag
gcgggctccgacctgctcgtccgcgccgcgttccacacccacgggatggacgtggtgacg
acccggtgctcgaacaactacgggccctaccagttccccgagaagctgatcccgctgttc
atcaccaacgccctggccgacgtccccgtcccggtctacggcgacggcatgcaggtccgc
gactggatccacgtgatggaccactgccggggcgtcgacgccgccctgcggaacgggaag
gccggcgaggtctacaacttcggcggcctgagcgagcggttcaacatggacgtcacccgc
gccgtcttgcggctcaccgggaagaccgaggccctcatcaagtacgtcaccgaccggctc
ggccacgaccgccgctacgccgtcgactgctccaagtcggagcgcgagctgggctggaag
ccgaccgtcaccttcgagcaagggctggaagagaccgtcgcctggtacaaggccaacgcc
gcctgggtcgaccgggtgaagtccggcgcgtaccgcaaccaggacgcctga
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