Planctomyces sp. SH-PL62: VT85_26115
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Entry
VT85_26115 CDS
T04401
Name
(GenBank) Recombinase
KO
K06400
site-specific DNA recombinase
Organism
plh
Planctomyces sp. SH-PL62
Brite
KEGG Orthology (KO) [BR:
plh00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99978 Cell growth
VT85_26115
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Gene cluster
GFIT
Motif
Pfam:
Resolvase
Recombinase
HTH_23
Sigma70_r4_2
HTH_30
HTH_Tnp_1
HTH_28
HTH_7
HTH_29
HTH_36
Motif
Other DBs
NCBI-ProteinID:
AMV40937
UniProt:
A0A142YP18
LinkDB
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Position
pPL62-2:27563..29821
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AA seq
752 aa
AA seq
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MDEPTPDGDAVRPRPAAATDTDRLIDELVVAAHRRTPQEQCGQVGAIYARYSTKAQGSVG
DQVRSVLEAAARLKIHVPREFVFYDEAVSGSRNRRPGLDRLRATLARRGAVQAVLVFATN
RLGRTAYHAMQIVHEEMVGRDIRCVFTSNNIDTADGHTWQLLLQAYSMVDQMVVASAAAH
IHAAHEAMFDQGLVHGAVTYGYRGREVGEGRGVRKGRPLREYEIDPEAAPWILRAFEWYA
REGLSIGEVVRRLNAEPRAPRNPRLLAGWDHAAVRRMLGNPRYRGHWMYGETKAVCHPGK
ASTAHVRRDAPLKSARLEHLRIVPEDLWLRARARLAEGDRRAAGRKPRDGDHRSRPRALA
GLFHCGAHGRRMQAGGGHGKMLICKDCMGTPRERRSLCSILNRRLALKLTCEALALRIRR
DDGLATAIVAASRSAAASLQSPDPAHLVGLRTRIEALTRRIGFVMDNPGAEPRDVLEAKA
KLQQLRRERSALESDLGRIEADAARAVEVPDEGAVREMLSRLGATLDEAAGEGDAPEDRA
VREVVDALTGGRVDLFQEGGREPKRGWLRGSFRFDLERLARLAGFPAIPAPPDGPDPREL
VRIDYREPAPCEAHATAVKALYDEGVLVKEIAARLGISRNLAAKALAWWHRSRDLEPPDG
RSRRSSLPVDARSLTPPLYVRLADEALRLSEQGLLYEEVAARLGCDRNTAAKAIKRASEL
RGTPAQDGRSRRKTLDRYRRGRDADAAPPGTA
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggacgaacccaccccggacggcgacgccgtccgaccccgcccggcggccgcgaccgac
accgaccggctgatcgacgagctcgtcgtcgccgcccaccggcggaccccgcaggaacag
tgcggccaggtcggcgcgatctacgcgcgttactccaccaaggcccaggggagcgtcggc
gaccaggtgcggtcggtcctcgaggcggccgcgaggctgaagatccacgtcccgcgcgag
ttcgtcttctacgacgaggccgtcagcgggagtcggaatcgacgccccggcctcgaccgg
ctccgcgcgaccttggcccggcgcggtgccgtgcaggccgtcctcgtcttcgccaccaac
cggctcgggcgcaccgcctaccatgcgatgcagatcgtccacgaggagatggtcggccgc
gacatccgctgcgtcttcacgtcgaacaacatcgacacggcggacggccacacgtggcag
ctgctcctgcaggcctattccatggtcgaccagatggtcgtcgcctccgccgccgcgcac
atccacgccgcgcacgaggcgatgttcgaccagggcctggtccacggggcggtgacctac
ggctaccgcggccgcgaggtcggggagggccggggcgtccggaagggccggcccctccgg
gagtacgagatcgaccccgaggccgccccctggatcctgcgggcgttcgagtggtacgcc
cgcgagggcctctcgatcggcgaggtcgtccgccgcctcaacgccgagccgcgggccccg
cgcaacccgaggctcctcgccggctgggaccatgcggcggtccggcggatgttgggcaac
ccccgataccggggccattggatgtacggggagaccaaggccgtctgccaccccgggaag
gcctccacggcccacgtgcgccgggacgcgcccctcaagtcggcccggctggagcacctc
cggatcgtccccgaggacctctggctccgggcccgggcccggctcgcggagggggaccgc
cgcgccgccggccgcaagccgcgggacggcgaccaccgttcccggcccagggccctggcg
ggcctgttccattgcggcgcccacggccggcggatgcaggccggcggcggccacggcaag
atgctgatctgcaaggactgcatggggacgccgcgcgagcggaggtccctctgttcgatc
ctcaaccggcgcctggcgctgaagctgacgtgcgaggccctggccctgcggatccggcgg
gacgacggcctggcgacggccatcgtcgcggcctcgcgctccgccgcggcctcgctccaa
tccccggacccggcccacctggtcggcctcaggacgcggatcgaggccctcacgaggcgg
atcgggttcgtgatggacaaccccggggcggagccgcgcgacgtcctcgaggcgaaggcg
aagctgcagcagctgcgccgcgagaggtcggccctggagtcggacctcggccggatcgag
gccgacgccgcccgagccgtcgaggtcccggacgagggggccgtccgcgaaatgctgtcg
aggctcggcgcgaccctcgacgaggccgcgggggagggggacgccccggaggaccgcgcg
gtccgcgaagtcgtcgacgccctcaccgggggccgcgtcgacctgttccaggagggcggt
cgcgagcccaagcggggctggctccgggggagcttccggttcgacctggagaggctggcc
cgcctggcgggattcccggcgatccccgccccccccgacggccccgatccgcgcgaattg
gtccgcatcgactaccgggagccggcgccgtgcgaggcccatgcgacggccgtcaaggcg
ctgtacgacgagggcgtcctggtcaaggagatcgccgcccgattggggatctcccgcaac
ctggccgccaaggccctggcctggtggcaccgcagccgggacctcgagccccccgacggc
cgttcccgccgctcctcgctccccgtcgacgcgaggagcctcacccccccgctctacgtc
cggctggcggacgaggcgctgcggctcagcgagcagggcctgctctacgaggaggtcgcc
gcccgcctggggtgcgaccggaacacggccgccaaggcgatcaagcgggcttccgagctc
cgggggacgcccgcccaggacggccgatcgcgccgcaagaccctggatcgataccggcgg
ggccgcgacgccgacgcggccccgcccgggacggcctga
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