Candidatus Portiera aleyrodidarum AF-CAI: PLF_077
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Entry
PLF_077 CDS
T03738
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pli
Candidatus Portiera aleyrodidarum AF-CAI
Pathway
pli03030
DNA replication
pli03430
Mismatch repair
pli03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pli00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PLF_077 (holA)
03430 Mismatch repair
PLF_077 (holA)
03440 Homologous recombination
PLF_077 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pli03032
]
PLF_077 (holA)
03400 DNA repair and recombination proteins [BR:
pli03400
]
PLF_077 (holA)
Enzymes [BR:
pli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PLF_077 (holA)
DNA replication proteins [BR:
pli03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PLF_077 (holA)
DNA repair and recombination proteins [BR:
pli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PLF_077 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
CEL12336
LinkDB
All DBs
Position
I:78217..79170
Genome browser
AA seq
317 aa
AA seq
DB search
MKIFSYQLSEYLNNNFSTLYLLSGSEPVVYLEVCDMIRAKFTSLGRVYRKVLYIEKEKSW
CKQLLKVSTNLSLFAILKLIEIQFLRLPPNLQYIKNLYKLLKSNNIFLLIMIPHIDYKIQ
QTKWFKELEAISVFVPTLKIEDISGWIFNRAEKKHKISLNIDAISLLKQRYEGNLIALDK
LISHYPKFLKAQDIFKTLPDNSRFNGIDLLDACILGDPLRCICIIQFLQLSDFDVSIILW
YLISEFRILIFKTVGIKKINKKHKKALQRLSISSIHKMLLFAQYLDNAIKHKHEDNILWV
FLNNLALMLAGALKPYE
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatattttcttatcagctttctgagtatttaaacaacaatttctctaccctttat
cttttatctggatctgaacctgtggtatatctggaagtctgtgacatgattcgtgcaaaa
tttacttcattaggtagggtatatcgtaaagttctatatatagaaaaagaaaaaagctgg
tgtaaacaactattgaaagtctctactaatttatcactttttgccatacttaagctcata
gaaatacaatttcttagactcccacccaatcttcaatatattaaaaatctttataagcta
ttaaagagtaataatatttttttattgattatgattccacatatagattataaaatacaa
caaacaaaatggtttaaagaactagaagcaattagcgtttttgtaccaactctaaaaata
gaagatatttctggttggatttttaatcgagcagaaaaaaaacataaaatcagtcttaat
atagatgctatttcacttttaaagcagcgttatgaaggtaatttgattgccttggataaa
ttaatatcccattaccctaagtttttaaaggcacaggatatatttaagactcttccggat
aattcacgatttaatggaattgatttgctggatgcttgtattttaggtgacccgctccgc
tgcatatgtattattcaattcttgcaactctcagattttgatgtatctattattttatgg
tatttaattagtgaattccgtatacttatatttaaaacagtgggtataaaaaaaataaat
aaaaaacataaaaaagcactacaaaggttatctatttcttccatacataaaatgttatta
tttgctcaatatttagacaatgccattaaacataaacatgaggataatatcctttgggta
ttcttgaataatttagctctaatgttagcaggagctcttaaaccttatgaatag
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