Candidatus Portiera aleyrodidarum AF-CAI: PLF_259
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Entry
PLF_259 CDS
T03738
Symbol
groEL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pli
Candidatus Portiera aleyrodidarum AF-CAI
Pathway
pli03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pli00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PLF_259 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pli03019
]
PLF_259 (groEL)
03110 Chaperones and folding catalysts [BR:
pli03110
]
PLF_259 (groEL)
03029 Mitochondrial biogenesis [BR:
pli03029
]
PLF_259 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pli04147
]
PLF_259 (groEL)
Enzymes [BR:
pli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
PLF_259 (groEL)
Messenger RNA biogenesis [BR:
pli03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
PLF_259 (groEL)
Chaperones and folding catalysts [BR:
pli03110
]
Heat shock proteins
HSP60 / Chaperonin
PLF_259 (groEL)
Mitochondrial biogenesis [BR:
pli03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
PLF_259 (groEL)
Exosome [BR:
pli04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PLF_259 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
PLF_259 (groEL)
Exosomal proteins of breast cancer cells
PLF_259 (groEL)
Exosomal proteins of colorectal cancer cells
PLF_259 (groEL)
Exosomal proteins of bladder cancer cells
PLF_259 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DOCK_N
DHC_N2
Phage_GP20
Motif
Other DBs
NCBI-ProteinID:
CEL12490
LinkDB
All DBs
Position
I:232837..234483
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKQIRFSEDARSRMVRGVNALADAVKTTLGPKGRNVVLEKSFGAPTITKDGVSVAKDI
ELKEKFENMGAQMVKEVASKTADVAGDGTTTATVLAQAIVNEGIKQINSGRNPMDLKRGI
DKAIRASVEEIKKISVKCADSRSIAQVGTISANGDSKIGQLIAKAMEKVGKKGVITVDES
RGFEDELEVVEGMQFDRGYISPYFVTNQENMTVELESPYILIVEKKISNIRELLPLLESV
AKSGKPLVIISEDIEGEALATLVVNNMRGIVKVAAAKAPGFGDRRKAMLQDIAILTGSTV
ISSDIGLNIEKATLNNLGNARRITMSKETTTIIDGAGSEKDIESRVKQIRKQIEETTSDY
DKEKLQERVAKLAGGVAVIRVGAATEIEMKEKKARVEDALHSTRAAVEEGVVAGGGTALI
RILNKLQNLKGNNDDQTHGIKIALKAFESPLRQIVKNAGEESSVILNKVKEGEGNFGYNV
NTGEFGDLINMGVLDPAKVTRTVLQSAGSIGGMIITTEAMIADHTEDNKNNTNNHPNAPD
MSGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaacagattagattttctgaagatgcacgaagtcgtatggtacgaggagtt
aatgcacttgctgatgcagttaaaacaacattagggccaaaaggccggaatgtggtttta
gaaaagtcatttggcgcacctacaataactaaagatggagtttctgtagctaaagatata
gaattaaaagagaaatttgaaaatatgggggctcaaatggttaaagaagttgcctccaaa
acagcagatgtagcaggagatgggacaacaacagctaccgtcttagcccaagctatagtt
aatgaaggaattaaacaaattaattctggaagaaatcctatggatttaaaaagagggata
gataaagcaataagagcttctgttgaagaaataaaaaaaatatctgtaaaatgtgcagat
tcaagatcaattgctcaagttggtacgatttcagctaatggagatagtaagattgggcag
ttaatagcaaaagctatggaaaaagttggaaaaaaaggtgtaataacagtagatgaaagt
aggggatttgaagatgaattagaggttgtagaaggtatgcaatttgatagaggttatatt
tctccttattttgtcactaatcaagaaaatatgacagtagaattagaatccccatatata
cttatagtagagaaaaaaatttcaaatattcgggaattattgccgttattagaaagtgtt
gcgaaatcaggaaaaccgttagtgataatatctgaagatatagaaggtgaagcattagct
acattagtagttaataatatgagagggatagttaaagtagcagcagctaaagccccaggg
tttggcgatcggcgcaaagcaatgttacaagatatagcaatccttacaggtagtacagta
atatcttcagatataggactaaatattgaaaaagcaacattaaataatttagggaatgct
cgtagaattactatgtctaaagaaactactacaataattgatggagcaggttcagaaaaa
gatatagaatctagggtaaaacaaattagaaaacaaatagaagaaactacttctgattat
gataaagaaaaacttcaagaaagagtagccaaactagcaggtggggtagctgttataaga
gttggagcagctacagaaatagaaatgaaagaaaaaaaagctagagtagaagatgcttta
cattctacacgtgctgctgtagaagaaggggttgtagcaggtggaggtacagctttaatt
agaatattaaataaattacaaaatttaaaaggtaataatgacgatcaaacccatggaata
aaaattgctctaaaagcatttgaatcacctttaagacaaattgttaagaacgcaggtgaa
gaatcatctgtaatacttaataaggttaaagaaggggaaggaaattttggatataatgtt
aatacaggggaatttggtgatttaataaatatgggtgttttagatcctgctaaagttact
agaactgttttacaatctgctggttcaataggtgggatgattataacaacagaagctatg
atagcagaccatactgaagataataaaaataatactaataatcaccctaatgctccagat
atgagtggaatgggtggaatgatgtaa
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