Paracoccus liaowanqingii: E4191_03075
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Entry
E4191_03075 CDS
T07041
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
plia
Paracoccus liaowanqingii
Pathway
plia03030
DNA replication
plia03430
Mismatch repair
plia03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plia00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E4191_03075 (dnaE)
03430 Mismatch repair
E4191_03075 (dnaE)
03440 Homologous recombination
E4191_03075 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plia03032
]
E4191_03075 (dnaE)
03400 DNA repair and recombination proteins [BR:
plia03400
]
E4191_03075 (dnaE)
Enzymes [BR:
plia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E4191_03075 (dnaE)
DNA replication proteins [BR:
plia03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E4191_03075 (dnaE)
DNA repair and recombination proteins [BR:
plia03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E4191_03075 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
QBX33812
UniProt:
A0A4V1BIS5
LinkDB
All DBs
Position
645777..649262
Genome browser
AA seq
1161 aa
AA seq
DB search
MAPKSPRFIHLRTHSEHSLLEGAIPVGKLPGLAADAGMPAVALTDSNNMFAALEFSVKAR
DKGIQPIVGCQVTLAAEATGPVVLLAQDRAGWLNLMALSSCLYLREGGALPHVTLDELCA
RSEGLICLTGGATGPLGQLVAQGQGPKAEALVDRLTAAFPTRLYVELQRHPGETGQLMAA
EAASEAGLIALAYARDLPLVATNDVYFPKTTMYEAHDALICIAEKAYVDQSQPRRRLTPQ
HYFKSPEEMAVLFADLPEAIENTVEIARRCAFAVARHAPILPKFADDEVAELRRQAQAGL
AERLKVIPHAVTPEDYAARLEFELGIIEQMGFPGYFLIVADFIRWAKDQGIPVGPGRGSG
AGSLVAYALTITDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIRYVQGKYGAD
KVGQIITFGALLSKAAVRDVGRVLQLPFGQVDRLSKMIPLEGVKPVSIAKARADEPRLRE
AAREEVVARLLDYAEQLEGLYRNASTHAAGVVIGDRPLDQLVPLYRDPASDMPATQFNMK
WVEQAGLVKFDFLGLKTLTVIQNAVDLINGAGRPLHVAADGRQLYDPTPGTENQINLIPL
DDAPSYELFASARTVAVFQVESSGMMDALRRMKPTCIEDIVALVALYRPGPMENIPTYCE
VKNGLRDLESIHPSIDHILAETQGIIVYQEQVMQIAQVMAGYSLGGADLLRRAMGKKIAA
EMAKERPKFVKGAVAAGVPDKKAGEVFDLLEKFANYGFNKSHAAAYAVVSYQTAWLKANH
PVEFMAAVMNCDIHLTDKLAIYKRECDRMGIEMVPPCVNRSAPGFTTGPGRIHYALGALK
GVGLEAMRLIHDARRAGGEGDQPFRDIHDFARRVDMKRVGKRPLEMLARAGAFDILDDNR
ARVMKSLDALVAWSAAVQDQAASTQTSLFGGGEDLPPPRPALAGIWLPTEKLAEEHKAIG
FYLSGHPLDDYLPALRRKKVQTLAEISQDALQGPLVAQIAGTVAARMERKSAKGTAYAFV
SLSDPTGLYEVTVFSDLLTASRDKLEPGQNVVLQVKVEPSGDQIKMLANSVSALEDAVAD
AGAGCLAVEMQGADTIPRLVEVLTRIRTDIVVPPRSRGPIRLRLREGDDLIEIEVAGDAP
LTTPARQALRAVPGVLEVLEE
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atggccccaaaatccccccgattcatccaccttcgcacacattctgagcattctttgctg
gaaggtgccattcctgtaggcaaattgccgggacttgccgcagatgcaggcatgcccgcc
gtggcgctgaccgacagcaacaacatgttcgccgcgctggaattcagcgtgaaggcccgc
gacaagggcatccagccgatcgtcggctgccaggtgacgctggccgccgaggcgaccggc
ccagtggtgctgctggcgcaggatcgcgccggctggctgaacctgatggcgctgtcctcg
tgtctgtacctgcgcgagggcggggcgctgccgcatgtcacgctggacgagctgtgcgcc
cggtccgaggggctgatctgcctgaccggcggggcgacggggcccctgggccagctggtc
gcgcaggggcaggggcccaaggccgaggccctggtcgaccgcctgaccgccgccttcccc
acccgcctctatgtggaactgcagcgccatcccggcgaaaccggccagctgatggccgcc
gaggccgcgtccgaggccgggctgatcgcgctggcctatgcgcgcgacctgccgctggtc
gccacgaacgacgtctacttccccaagaccaccatgtacgaggcgcatgacgcgctgatc
tgcatcgcggaaaaagcctatgtcgaccagtcccagccccgccgccgcctgacgccgcag
cattacttcaagtcgcccgaggaaatggcggtgctgttcgccgacctgcccgaggcgatc
gagaacaccgtcgagatcgcccgccgctgcgccttcgccgtggcccgccacgccccgatc
ctgcccaagttcgccgatgacgaggtggccgagctgcgccgccaggcgcaggcggggctg
gccgaacggttgaaggtcatcccccatgccgtcacccccgaggactatgccgcgcggctg
gaattcgagctgggcatcatcgagcagatggggttccccggctatttcctgatcgtcgcc
gacttcatccgatgggccaaggaccagggcatcccggtcggaccggggcgcgggtcgggg
gcgggcagcctggtggcctatgcgctgaccatcacggacctcgatccgctgcgctacagc
ctgctcttcgaacgcttcctgaacccggaacgggtcagcatgcccgacttcgacatcgac
ttctgcatggaccgccgcgaggaggtgatccgctacgtgcagggcaagtacggggccgac
aaggtggggcagatcatcaccttcggcgcgctgctgtccaaggccgccgtccgcgacgtg
ggccgggtgctgcagctgcccttcggccaggtggaccgcctgtccaagatgatcccgctg
gagggcgtcaagcccgtcagcatcgccaaggcccgcgccgacgagccgcgcctgcgcgag
gccgcccgcgaggaggtcgtggcccgactgctggactatgccgagcagctggaggggctc
tatcgcaacgcctcgacccatgcggcgggcgtggtgatcggggaccggccgctggaccag
ctggtgccgctctatcgcgatccggcctccgacatgccggccacgcagttcaacatgaaa
tgggtggaacaggccggtctggtcaagttcgacttcctggggctgaagaccctgacggtg
atccagaacgccgtcgacctgatcaacggcgccgggcggccgctgcatgtcgccgccgac
gggcggcagttgtacgaccccaccccgggcaccgaaaaccagatcaacctgatcccgctg
gacgacgcacccagctacgagctcttcgcctcggcccgcacggtggcggtcttccaggtg
gaatcctcgggcatgatggatgcgctgcggcgcatgaagcccacctgcatcgaggatatc
gtggcgctggtcgccctctatcgccccggtccgatggagaacatccccacctattgcgag
gtcaagaacggcctgcgcgacctggaatccatccatcccagcatcgaccacatcctggcc
gaaacgcagggcatcatcgtctatcaggaacaggtgatgcagatcgcgcaggtcatggcg
ggctattcgctcggcggcgccgacctgctgcgccgcgccatgggcaagaagatcgccgcc
gagatggccaaggaacgccccaagttcgtcaagggcgcggtggccgccggggtgcccgac
aagaaggcgggcgaggtcttcgatcttttggaaaagttcgccaattacggcttcaacaag
tcccacgccgccgcctatgcggtcgtcagctaccagaccgcctggctcaaggccaaccac
ccggtcgagttcatggccgccgtgatgaactgcgacatccacctgaccgacaagctggcc
atctacaaacgcgaatgcgaccgcatggggatcgagatggtgccgccctgcgtcaaccgc
tcggcccccggtttcaccaccgggccgggccgcatccactatgccctgggcgcgctcaag
ggcgtgggcctcgaggcgatgcgtctgatccatgatgcgcggcgtgcgggcggggagggg
gaccagcccttccgcgacatccacgacttcgcccgccgcgtcgacatgaagcgcgtgggc
aagcgcccgctcgagatgctggcccgcgccggggccttcgacatcctcgacgacaaccgc
gcccgggtgatgaagtcgctggacgcgctggtcgcgtggtcggcggcggtgcaggatcag
gcggcctcgacccagacctcgctgttcggcgggggcgaggatctgccaccgccccgcccg
gcgctggcgggcatctggctgccgactgagaagctggccgaggagcacaaggccatcggc
ttctacctctccggccatccgctggacgactacctgccggcgctgcgccgcaagaaggtc
cagaccctggccgagatcagccaggacgcgctgcagggcccgctggtggcccagatcgcc
ggtaccgtggccgcgcggatggaacgcaagtcggccaagggcacggcctatgccttcgtc
agcctgtccgacccgaccggtctctacgaggtcacggtcttctccgacctgctgaccgcg
tcccgcgacaagctggagccggggcagaacgtcgtgctgcaggtcaaggtcgaaccctcg
ggcgaccagatcaagatgctggccaattcggtctcggcgctcgaggatgcggtggccgat
gccggggcaggctgtctggccgtcgagatgcagggtgccgacaccatcccccgcctggtc
gaggtgctgacccgcatccgcaccgacatcgtcgtgccgccccgctcgcgcggcccgatc
cgcctgcgcctgcgcgagggcgacgacctgatcgagatcgaggtcgcgggtgacgccccc
ctgaccacccccgcccgtcaggccctgcgcgccgtcccgggcgtcctcgaggtcctcgag
gaataa
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