Paracoccus liaowanqingii: E4191_04530
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Entry
E4191_04530 CDS
T07041
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
plia
Paracoccus liaowanqingii
Pathway
plia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E4191_04530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plia03019
]
E4191_04530
03009 Ribosome biogenesis [BR:
plia03009
]
E4191_04530
Enzymes [BR:
plia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
E4191_04530
Messenger RNA biogenesis [BR:
plia03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
E4191_04530
Ribosome biogenesis [BR:
plia03009
]
Prokaryotic type
rRNA helicases
E4191_04530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
QBX34055
UniProt:
A0A4P7HJ14
LinkDB
All DBs
Position
948762..950681
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AA seq
639 aa
AA seq
DB search
MTELNIPAPLQAALADKGYESLTSVQSAVLAPEAQGRDVLVSAQTGSGKTVAFGLAIGAD
LLDDAGQMLQGMQPLALAIAPTRELALQVARELEWLYAGTGAQIATCVGGMDYRNEKRAL
QRGAQIVVGTPGRLRDHIDRGSLDLTDLRAAILDEADEMLDLGFREDLEFILGAAPVERR
TLMFSATVPQAIEKLARDFQRDALRIAAMGEARQHGDIAYRAYTVTARDREPAIFNLLRI
HEAPNAIVFCKTRANVNHLLARMSNRGFKCVALSGELSQQERTHALQALRDGRARVCIAT
DVAARGIDLPGLELVIHADLPTNPDTLLHRSGRTGRAGSKGISALIVPSADYRRAQRLMQ
NAKVTAEWLDAPTADEVRARDDQRMLDHPGLTEPAGDDAPLAAQLLEQFSAEQVAVAFLK
MWREGRPAAEELSEAHAPPAPMAPRPQREFGPSVWFTLSVGHSGRAEARWLLPKVCDAGG
ITRDGIGAIRVKQDLSYIQIAAEQADRFGDFMEITPEVTMRRMEGEPDLDAQPERAPRAP
RGETRTDNRSEGRKPAPRAKPAAADGDHQSRVKAARGGWVPDDAAAAEPRETGPHPAVKA
WKKKSSADAGKPAWAKGKPRSTDKPSAPKAHRKGPRQPG
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaactgaatatccccgcaccgttgcaggcggcgttggccgacaagggctacgag
tccctgaccagcgtgcaatccgccgtcttggcgcccgaggcgcagggccgcgacgtgctg
gtctcggcccagaccgggtcgggcaagaccgtggccttcggcctggccatcggcgcggac
cttctggacgacgcgggccagatgctgcagggcatgcagcccctggcgctggccatcgcg
ccgacccgcgagctggccctgcaggtcgcacgcgagctggagtggctctatgccgggacc
ggcgcgcagatcgccacctgcgtcggcggcatggattatcgcaacgagaagcgcgccctg
cagcgcggcgcgcagatcgtcgtcggcacgccgggccgcctgcgcgaccatatcgaccgc
ggcagcctggatctgaccgacctgcgggccgcgatcctggacgaggccgacgagatgctg
gacctgggcttccgcgaggacctggagttcatcctgggcgccgcgccggtcgagcgccgc
acgctgatgttctcggccaccgtgccgcaggcgatcgagaagctggcccgcgacttccag
cgcgacgcgctgcgcatcgccgccatgggcgaggcgcgccagcacggcgacatcgcctat
cgcgcctacaccgtgaccgcccgcgaccgcgagcccgcgatcttcaacctgctgcgcatc
cacgaggcgcccaatgccatcgtcttctgcaagacgcgggccaacgtgaaccacctgctg
gcgcgcatgtcgaaccggggcttcaaatgcgtggccctgtcgggcgagctgtcccagcag
gaacgcacccatgcgctgcaggcgctgcgcgacgggcgcgcccgcgtctgcatcgcgacc
gacgtggcggcgcgcggcatcgaccttccggggctggaactggtgatccatgccgatctg
ccgaccaatcccgacacgctgctgcaccgctcgggccgcacgggccgcgcggggtccaag
gggatctcggcgctgatcgtgccgtccgccgactatcgccgcgcgcagcggctgatgcag
aacgccaaggtgaccgccgaatggctggacgcccccaccgccgacgaggtccgcgcccgt
gacgaccagcgcatgctggatcatcccgggctgaccgagcccgcgggcgacgacgccccg
ctggctgcgcagctcttggagcagttcagcgccgagcaggtcgccgtggcgttcctcaag
atgtggcgcgaaggccgccccgccgccgaggaactgtccgaggcgcatgccccgccggcg
ccgatggcgccgcgcccgcagcgcgagttcggcccctcggtctggttcacgctgtcggtc
ggccattcgggccgcgccgaggcgcgctggctgctgcccaaggtctgcgatgcgggcggg
atcacccgcgacggcatcggcgcgatccgcgtcaagcaggacctgtcctatatccagatc
gccgccgagcaggccgaccgcttcggcgacttcatggagatcacccccgaggtgaccatg
cgccggatggagggcgagcccgatctggacgcgcagcccgaacgcgcgccccgcgcgccg
cgcggcgagacccggacggacaaccggtcggaagggcgcaagcccgcgccccgtgccaag
cccgcagcggcggatggcgaccaccagagccgcgtgaaggccgcccgcggcggatgggtg
cccgatgacgccgccgccgcagagccgcgcgagaccggcccgcacccggcggtgaaggcg
tggaagaagaaatcctcggccgacgcgggcaagcccgcttgggccaagggcaagccgcgc
agcaccgacaagccctcggcgcccaaggcccatcgcaaggggccgcgtcagcccggctga
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