Paracoccus liaowanqingii: E4191_11445
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Entry
E4191_11445 CDS
T07041
Name
(GenBank) ribonuclease E/G
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
plia
Paracoccus liaowanqingii
Pathway
plia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E4191_11445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plia03019
]
E4191_11445
03009 Ribosome biogenesis [BR:
plia03009
]
E4191_11445
Enzymes [BR:
plia01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
E4191_11445
Messenger RNA biogenesis [BR:
plia03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
E4191_11445
Ribosome biogenesis [BR:
plia03009
]
Prokaryotic type
rRNA processing factors
E4191_11445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
QBX35240
UniProt:
A0A4P7HNC4
LinkDB
All DBs
Position
complement(2381208..2383949)
Genome browser
AA seq
913 aa
AA seq
DB search
MAMKMLIDATHAEETRVVVVDGTKVEEFDFETANRRQIAGNIYLAKVTRVEPSLQAAFID
YGGNRHGFLAFAEIHPDYYQIPAADREALKAEERAHADAQEAEEERGRSRRSSRSERAER
AEQDDETTSDGDEAQGQDASDKDDEIESVADEDLTEEVRAPRKPRARRYKIQEVVKVRQI
MLVQVVKEERGNKGAALTTYLSLPGRYCVLMPNTARGGGISRKITNAADRKKLKDIAGEL
DVPKGAGLIIRTAGSERTRTEIRRDYEYLLRLWEQIRELTFRSIAPAPIYEEGDLIKRNI
RDLYSKDIDEVLVEGERGYQAARDFMQMIMPTHTDSVKHYQDQMPLFARFQVESYLAGMF
NPTVQLKSGGYIVIGITEALVAIDVNSGRATKEGSIEETALKTNLEAADEVARQLRLRDL
AGLIVIDFIDMDERRNNAAVEKRIKDKLKSDRARIQIGRISGFGLMEMSRQRLRPGMLES
TTQPCAHCHGTGLIRSDDSLALTILRAIEDEGTRKRSREVLVKAPIAVANFLMNGKREHV
ANIEARYGMSVRVEADPALVSPDYAIEKFKTATRVLPEPSKVPLGVNADLMASIDDEEDL
DDIDQPIEAMAEEPEAEAAPAPARSDAEPEARGSEGDADADGEGRSRRRRRRRRRKSGDR
SETEGQDMRSGDDQDDDEDEEGADDATSEAEVETETEDSPAPTRSGRSRRRGGRQDRDDR
DDERQATEAAEPAMADAASDEPAADAPAEAEAEPAGNGRRTRSRGRGRSRRPVDAEALPE
VMDLDDGRDGRAEALPDQAAPVSDPEASQMRSAAQADGATPFGSPVAALTPDAIPEAEAI
AEAMVESAAAPVEPEAEAPEEDDDTRYAVAPAPIPAPAPAPAPAAPPAPANQPQPATQDS
APQSKRRGWWSGS
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgaaaatgctgatcgacgccacccatgccgaggaaactcgggtggtcgtggtc
gacggaaccaaggtcgaggaatttgacttcgagacggccaaccgccgccagatcgcgggg
aacatctatctcgcgaaggtgacgcgggtcgagccctcgctgcaggcggccttcatcgat
tacggcggaaaccgccacggattcctggccttcgccgagatccaccccgactattaccag
atccccgccgccgaccgcgaggccctcaaggccgaggaacgcgcccatgccgacgcccag
gaggccgaggaagagcgcggccgctcgcgtcgcagctcgcgctccgagcgcgccgaacgt
gccgagcaggatgacgagacgacctcggacggcgacgaggcccagggccaggacgcttcc
gacaaggacgacgagatcgaatcggtggccgacgaggacctgaccgaagaggtccgcgcc
cccaggaagccccgcgcccgccgctacaagatccaagaggtcgtgaaggtccgccagatc
atgctggtgcaggtcgtcaaggaagagcgcggcaacaagggcgccgcgctgaccacctac
ctgtcgctgccgggccgctactgcgtcctgatgcccaacaccgcgcgcggcggcgggatc
tcccgcaagatcaccaatgccgccgaccgcaagaagctcaaggacatcgccggagagctg
gacgtgccgaagggcgcgggcctgatcatccgcaccgccggcagcgagcgcacccggacc
gagatccgccgcgactacgaatacctgctgcgcctgtgggaacagatccgcgaactgacc
ttccgctcgatcgcgcccgcgccgatctacgaggaaggcgacctgatcaagcgcaacatc
cgcgatctctattccaaggacatcgacgaggtgctggtcgagggcgagcgcggctatcag
gcggcgcgcgacttcatgcagatgatcatgccgacccacacggacagcgtgaagcattac
caggaccagatgccgctcttcgcgcgcttccaggtcgaaagctatctggccggcatgttc
aatcccaccgtccagctgaagtcgggcggctacatcgtcatcggcatcaccgaggcgctg
gtcgccatcgacgtgaactcgggccgcgccaccaaggaaggctcgatcgaggagaccgcg
ctcaagaccaacctggaggcggccgacgaggtcgcccgccagctgcgcctgcgcgacctg
gccggcctgatcgtcatcgacttcatcgacatggacgaacgccgcaacaacgcggcggtg
gaaaagcgcatcaaggacaagctcaagtccgaccgcgcccgcatccagatcggccgcatc
tcgggcttcggcctgatggagatgtcgcgccagcgcctgcgccccggcatgctggaatcc
accacccagccctgcgcgcattgccatggcaccggcctcattcgcagcgatgacagcctg
gcgctgaccatcctgcgcgccatcgaggacgagggcacgcgcaagcgctcgcgcgaggtc
ctggtcaaggcgccgatcgcggtggccaacttcctgatgaacggcaagcgcgagcatgtg
gcgaacatcgaggcacgctacggcatgtccgtgcgcgtcgaggccgatccggccctcgtc
tcgcccgactacgcgatcgagaagttcaagaccgccacccgggtcctgcccgagccctcc
aaggtgcccctgggcgtcaatgccgacctgatggccagcatcgacgacgaggaggacctg
gacgacatcgaccagccgatcgaggccatggccgaggaacccgaggccgaggccgcgccg
gcccccgcccggtccgacgccgagcccgaggcccgcggatccgagggggatgccgatgcc
gatggcgagggccgctcgcgccgccgccgccgtcgtcgccgccgcaagtccggcgaccgg
tccgagaccgagggccaggacatgcgttcgggcgacgaccaggacgatgacgaggacgag
gagggcgccgacgacgcgacctccgaggccgaggtcgagaccgagaccgaggacagcccc
gcgccgacccgctcgggccgcagccgccgtcgcggcggacgccaggatcgcgacgaccgc
gacgacgagcgtcaggcgaccgaggccgctgaacccgcgatggccgatgccgcatccgac
gagcccgcagccgacgccccggcggaagccgaggccgagcccgccgggaacggccgccgc
acccgctcgcgcggtcgtggccggtcgcgcaggccggtcgatgccgaggcgctgcccgag
gtgatggatctggatgacggccgcgatggccgggccgaggcgctgcccgatcaggccgcc
cccgtctcggaccccgaggccagccagatgcgcagcgcggcccaggccgacggcgccacg
cccttcggaagcccggtcgctgccctgacgcccgacgcgatccccgaggccgaggccatc
gccgaagccatggtcgaaagcgccgccgccccggtggagcccgaggccgaggcacccgag
gaggacgacgacacccgctatgccgtcgcccccgccccgatcccggcgcccgctccggcc
ccggcaccggcagcccctccggccccggccaaccagccccagcccgccacgcaggacagc
gccccgcagtccaagcgccgcggctggtggtcgggcagctga
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