Candidatus Pristimantibacillus lignocellulolyticus: NAG76_00255
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Entry
NAG76_00255 CDS
T09890
Name
(GenBank) response regulator transcription factor
KO
K11618
two-component system, NarL family, response regulator LiaR
Organism
plig
Candidatus Pristimantibacillus lignocellulolyticus
Pathway
plig02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
plig00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NAG76_00255
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
plig02022
]
NAG76_00255
Two-component system [BR:
plig02022
]
NarL family
LiaS-LiaR (cell wall stress response)
NAG76_00255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
HTH_24
HTH_23
Sigma70_r4
HTH_28
HTH_40
TnsD
HTH_38
Sigma70_ECF
DUF6115
HTH_11
HTH_7
HTH_20
HTH_29
DUF742
Beta-ketacyl_N
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
URN94728
UniProt:
A0A9J6ZFS5
LinkDB
All DBs
Position
complement(63151..63813)
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AA seq
220 aa
AA seq
DB search
MSIDETVNIMIVDDHDMVRLGLKTYLMLEPSFSVIAECSHGQEALSLLNSMDDSQHPDLI
LMDLMMPVMNGIEATRSIIQRYPNMRIVMLTSFLEDEKVYQSIEAGAISYVLKTVSSEEL
IFALKGALKGMPVMTTEVSQSLTRGLRVQRTQQGDESFTEREREVLLLVADGMSNKEIAD
ELHISIKTVKTHVSNLLMKCELDDRTQLAVLAHRKGWANR
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgagtatagatgagacggtgaatattatgatcgtcgatgaccatgatatggttcgatta
ggtttgaaaacatatttgatgttggaacctagtttctctgttatcgcagaatgtagtcat
ggtcaagaagcactatcattgctgaattcgatggatgattctcagcatcctgatctaata
ttaatggacttaatgatgcctgtaatgaatggtatagaagcaacgaggagcattatccag
cgttaccctaatatgagaattgtaatgctaacaagctttcttgaagatgagaaagtatat
caatcaattgaagcgggagcaattagttatgtgctgaaaaccgtttcttcggaagaatta
atctttgctttgaaaggcgctcttaaaggtatgcctgttatgacaacggaagtttcacag
tcgttgacgagaggcttacgtgtacaacgtactcaacaaggcgatgaaagttttacagag
agagaaagagaagtactactactcgttgctgacggtatgtctaacaaagaaattgcagat
gagcttcatattagtattaagacggtgaagacacatgttagtaatctgcttatgaaatgc
gaacttgatgatcggacgcaattagcagtacttgctcaccgaaaaggatgggctaatcgc
tag
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