Candidatus Pristimantibacillus lignocellulolyticus: NAG76_00410
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Entry
NAG76_00410 CDS
T09890
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
plig
Candidatus Pristimantibacillus lignocellulolyticus
Pathway
plig00020
Citrate cycle (TCA cycle)
plig00190
Oxidative phosphorylation
plig00650
Butanoate metabolism
plig00720
Other carbon fixation pathways
plig01100
Metabolic pathways
plig01110
Biosynthesis of secondary metabolites
plig01120
Microbial metabolism in diverse environments
plig01200
Carbon metabolism
Module
plig_M00009
Citrate cycle (TCA cycle, Krebs cycle)
plig_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
plig00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NAG76_00410 (sdhA)
00650 Butanoate metabolism
NAG76_00410 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
NAG76_00410 (sdhA)
00720 Other carbon fixation pathways
NAG76_00410 (sdhA)
Enzymes [BR:
plig01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
NAG76_00410 (sdhA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
Pyr_redox_2
GIDA
FAD_oxidored
NAD_binding_8
DAO
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
URN94759
UniProt:
A0A9J6ZFE8
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Position
complement(100617..102374)
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AA seq
585 aa
AA seq
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MAKNKIIVVGGGLAGLMATIKAAEAGTHVDLFSIVPVKRSHSVCAQGGINGAVNTKGEGD
SPWEHFDDTVYGGDFLANQPPVKAMCEAAPGIIHLMDRMGVMFSRTSEGLLDFRRFGGTQ
YHRTAFAGATTGQQLLYALDEQVRRWEAAGLVTKYEHWEFLGSVIDDDGVCRGVAVQDLR
SMEIHTMRGDAVILASGGPGIIFGKTTNSVINTGTAASAVYQQGVKYANGEFIQIHPTAI
PGDDKLRLMSESARGEGGRIWTYKDGKPWYFLEEKYPAYGNLVPRDIATREIFSVCVDDK
LGINGENMVYLDLSHKDPKELDVKLGGIIEIYEKFMGDDPRKIPMKIFPAVHYSMGGMWV
DYNQMTNIPGLFAAGECDYNYHGANRLGANSLLSAIYGGMVAGPKAVEYIKGLKKSSEDI
SSTVFDKAVREQKAKYDRILGMKGTENAYVLHKELGEWMTNNMTVVRYNDKLAETIQKIK
ELKQRYNNININDTANWNNAGVAFTRQLWNMLELSEAMTLGALQRNESRGAHYKPEFTER
NDEEFLKTTIADWTPEGPKISYEDVDVSLIKPRTRDYSAGKKKGE
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaataaaattattgtcgttggtggcggtcttgctggtctaatggccacaatt
aaagccgctgaggcaggcacacatgtcgatctattctcaatcgttcccgttaaacgttca
cattccgtatgtgctcaaggtggtattaacggcgctgtaaatacaaaaggtgaaggcgat
tctccttgggagcattttgatgataccgtatatggcggtgacttcttagcaaatcaacca
ccagttaaagcaatgtgtgaagctgcacctggcattatccatttgatggaccgtatgggc
gtaatgttcagtcgtacatcagaaggtttgttagatttccgtcgtttcggtggaacacaa
tatcaccgtactgcatttgcaggtgctacgactggtcaacaactgttatatgcactagat
gagcaagttcgtcgctgggaagcagcgggactagttacgaaatatgagcattgggaattc
cttggttccgttattgatgatgacggcgtatgtcgtggtgtagctgttcaagatttacgt
tcgatggaaatccatacgatgcgcggtgatgcagttattcttgcatcaggtggtcctggt
attatctttggtaaaactacgaactccgttattaacacaggtactgctgcaagtgcggta
tatcaacaaggtgtgaaatatgccaatggtgagttcattcaaattcacccaactgcaatt
ccaggtgatgataagcttcgtctaatgagtgaatctgctcgtggtgaaggtggtcgtatc
tggacctacaaagacggtaagccttggtacttccttgaggagaaatatcctgcatatggt
aatctagttcctcgtgatatcgcaactcgtgaaatcttcagcgtatgtgttgatgacaaa
ttaggtattaacggtgaaaacatggtttaccttgatctgtctcataaagatcctaaggaa
cttgatgttaaacttggtggtatcattgaaatctatgagaaattcatgggtgatgatcct
cgtaaaataccaatgaaaattttcccagcagtccactattcaatgggtggaatgtgggta
gattataatcagatgacgaatattcctggtctttttgcagctggcgaatgtgactacaat
tatcatggagctaatcgtcttggtgctaattcactattatcagctatttacggtggtatg
gttgctgggccaaaagctgtcgaatatattaaaggtcttaagaaatcatcagaagatatt
tcatctacagtgtttgataaagctgttcgtgagcaaaaagcgaagtatgatcgtattctt
ggtatgaagggtactgaaaatgcatacgtactccacaaagagcttggcgaatggatgact
aacaacatgaccgttgttcgttacaacgacaagttggcagaaactattcaaaagattaaa
gaactgaaacaacgttataacaatattaacattaacgatacagccaattggaataatgca
ggtgtcgcatttactcgtcaattgtggaatatgcttgaactttctgaggcaatgacatta
ggtgcattgcaacgtaatgaatctcgtggtgcgcattacaagcctgaatttacagaacgt
aatgatgaagaattcttgaaaacgactattgcagattggactccagaaggtccgaaaatt
tcatatgaagacgttgacgttagcttgattaaacctcgtactcgtgattattctgcaggg
aagaagaaaggagaataa
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