Pristimantibacillus lignocellulolyticus: NAG76_06825
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Entry
NAG76_06825 CDS
T09890
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
plig
Pristimantibacillus lignocellulolyticus
Pathway
plig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NAG76_06825 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plig03400
]
NAG76_06825 (recF)
DNA repair and recombination proteins [BR:
plig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NAG76_06825 (recF)
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_21
AAA_27
NYD-SP28_assoc
AAA_29
Motif
Other DBs
NCBI-ProteinID:
URN95948
UniProt:
A0A9J6ZIS1
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Position
1638190..1639302
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AA seq
370 aa
AA seq
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MLLNSIKLQNYRNYESLDLDTPHMVNVFLGPNAQGKTNLLEAIFVLALSKSHRTTKDKEL
IGWNEESAYIAGQVDKKYGSVKLELSYSQKGKKAKLNGLEQRKLSDYVGALNVVMFAPED
LEIVKGTPGVRRRFLDMEIGQVQPGYLHWLQQYHKVLQQRNNVLKNGDARSDLAMLEVWN
MQLAQLGVKIMIKRQHFINKLQIYAKQIHAEITNHKEQLQLEYRPSFDCDASGDEAMLFD
QFMVKLTQVKEQEFRRGVTLVGPHRDDIGFFINDKEAQIFGSQGQQRTTALSIKLAELEL
IHEEIGEYPILLLDDVLSELDRNRQTQLIETFQSKVQTFITTTGLESVDMEKLHDAGIYY
VKEGKVSLSP
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
gtgctactaaatagtattaaattacaaaattatcgtaattatgaatctttagatttggat
acaccgcatatggtaaatgtgtttctcggaccaaacgcacaaggaaagactaatttgcta
gaagcaattttcgtactagcattgtctaagtcacatcgtacaacgaaggacaaagaactt
atcggctggaatgaagagtctgcttacattgcaggacaagttgataagaaatatggatca
gttaaacttgaattgagttacagtcaaaaaggcaaaaaagctaagttgaatggacttgaa
caacggaaactgagcgattacgttggcgctttaaatgttgtgatgtttgcacccgaggat
cttgaaatagttaaagggacgccaggggtacggagacgatttcttgatatggagatcggt
caggtacaacctggctatctgcattggttgcagcaatatcataaagtattacaacaacgt
aataatgtactaaagaatggtgatgcacgctctgatctagccatgttagaagtatggaac
atgcaactagcacaattaggtgttaaaattatgattaagaggcaacactttattaataag
ctacaaatttatgctaaacaaattcatgcagaaattacgaatcataaagagcaacttcag
ttagaatatcgtccttcattcgattgtgatgcttccggagatgaagctatgttatttgat
caatttatggtaaagttaacacaggtcaaagaacaggaatttcggagaggtgttacacta
gtaggacctcatcgcgatgatatcggattttttattaacgacaaggaagctcaaatattc
ggttctcaaggacagcagcggacaactgcattatctataaagcttgcagagttagaactc
attcatgaggagatcggtgaatatccgatcttacttttggatgacgtgttgtctgaactc
gatcgtaacaggcagacacaactaatagaaacctttcaaagcaaagtacaaacctttata
acaactactggtttagagagtgttgatatggagaagttgcacgatgcgggtatttattat
gtcaaagaaggcaaagtgagtttatctccgtga
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