Candidatus Pristimantibacillus lignocellulolyticus: NAG76_07945
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Entry
NAG76_07945 CDS
T09890
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
plig
Candidatus Pristimantibacillus lignocellulolyticus
Pathway
plig03420
Nucleotide excision repair
plig03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NAG76_07945 (pcrA)
03430 Mismatch repair
NAG76_07945 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plig03400
]
NAG76_07945 (pcrA)
Enzymes [BR:
plig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NAG76_07945 (pcrA)
DNA repair and recombination proteins [BR:
plig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NAG76_07945 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
NAG76_07945 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
CTLH
Motif
Other DBs
NCBI-ProteinID:
URN96150
UniProt:
A0A9J6ZJ45
LinkDB
All DBs
Position
1899551..1901884
Genome browser
AA seq
777 aa
AA seq
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MFSSFSIDDAVQKLNAPQREAVKATEGPLLIMAGAGSGKTRVLTHRIAYLIEKNRVAPWS
ILAITFTNKAAREMQERVSALVGASGRDIWVSTFHSMCVRILRKDIDRIGFSSNFSILDS
TDQLSVIRSCMKDENIDVKKVEPKSVQATISSAKNELISPEAYENKAGDYFQNIVAKIYK
MYQKRLKNNNSLDFDDLIMKTIQLFKEEPEALKFYQNKFRYIHVDEYQDTNRAQYMLCRM
LADQHHNICVVGDSDQSIYRWRGADISNILNFEDDYPEAKTIMLEQNYRSTANILNAANA
VIALNSGRKAKNLWTDQGEGNKISVYFAESDREEGYFVTGVIQNNMAKNRKYSDHAILYR
TNAQSRLIEETLIKSEIPYQIVGGIKFYDRKEIKDILAYLRLISNPDDDISLVRIINVPK
RGIGDTTVAKLAAAATAQGTSIYRVLSNIDLVDVKGKTREQLISFYNMISKLSAAVDELT
VTELTEKVLEMSEYKLELQRENTIESTTRVENIEEFLSVTMDFEQRNDDRTLVAFLTDLA
LIADIDSMNDDEEEKEKSQDTVILMTMHSAKGLEFPVVFIVGMEETVFPHSRALTDNDEL
EEERRLAYVGITRAEQQLYLSSAKMRTLFGRTAFNMPSRFLKEIPEEVREIVSPNGGNTR
SIGGGYTGGARTSTGSQQSGFGFGSSRSQGSSISTGGRSTVTVTSGLEAAKKAASSQSDQ
SGPVSYSAGDRVAHGKWGEGTVVSVKGKDNDMELQIAFPAPVGIKKLLASFAPIRKV
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgtttagttcatttagtatcgatgatgcggtgcagaagctgaatgctccgcaacgagaa
gcagtgaaagcgacagaaggtccattacttattatggcaggagcaggtagtggaaagact
agagtattaacgcatcgtatcgcctatctcattgagaaaaatagagtagctccatggagt
atattagctattacatttacgaataaagcggcaagagaaatgcaggagcgggttagcgct
ctagttggtgcatcaggacgtgacatttgggtgtctacattccactccatgtgcgtacgt
attttacgtaaagatattgaccgaatcggcttttcatcgaacttctcaattctcgattct
actgatcaattatctgttatccgtagttgtatgaaggatgaaaatattgatgtgaagaag
gttgagccgaaatcggtacaagcgacaataagctcagcgaaaaatgaactcatttctccc
gaggcgtatgagaacaaagctggagattacttccaaaacatcgttgccaaaatatataag
atgtatcagaaacgattaaaaaacaataactcgttagattttgatgatcttattatgaaa
acgatacagttatttaaggaagagccagaagcgttgaagttctatcaaaacaaattccgt
tatatacatgttgatgagtatcaagatacgaaccgtgcgcaatatatgttatgtcgaatg
cttgcagatcaacatcataatatatgcgttgttggtgatagcgatcagtcaatctatcgt
tggcgtggtgctgatatctcgaatattttgaactttgaagatgattatcctgaagcgaaa
acgattatgttagagcaaaattatcgttctacagccaatattctgaatgcagccaatgct
gttatagctctaaatagtgggcgtaaagcgaaaaacctatggactgatcaaggtgaaggt
aataaaatttctgtctactttgctgaaagtgatcgtgaggaaggttactttgtcacaggt
gtcattcagaacaatatggcaaagaatcgtaagtatagcgatcatgcgattctttatcgt
acgaatgcacaatcacgtttaatagaggaaacattaattaagtctgaaattccatatcaa
attgtaggcggaattaagttctatgatcgtaaagagattaaagacatactggcatatctt
cgtctcatctctaatccagatgatgatattagtcttgtacgtattattaatgttcctaaa
cggggtattggtgacaccacagtagctaagcttgctgctgcagctacagcgcaagggact
tcgatctatagagtattaagtaatattgatctagtagatgtgaaagggaaaacaagagaa
caacttatttccttctataatatgatttctaagctgagtgctgctgttgatgaactcact
gtaacggaattaacggagaaagttctcgaaatgtcggagtataaattagagttgcaacgt
gaaaatacgattgaatcaacgactcgtgtagagaatatagaagagttcttgtccgtaacg
atggattttgaacaacgtaatgatgatcgtacacttgttgcgtttcttaccgatttagcg
ttgattgcagatattgattccatgaacgacgatgaagaagagaaagagaagtcgcaagat
acagtaattctaatgacaatgcatagtgcgaagggtttagagttccctgtcgtatttatt
gtagggatggaagagacggtattcccgcattcgcgtgcgttaacggataacgacgaatta
gaggaagaacgtcgacttgcatatgtaggaattacacgtgcagagcaacagttatattta
tcgtcagcgaaaatgagaacattatttggtcgtaccgcatttaatatgccttcacgcttc
cttaaggaaatccctgaagaagttcgtgagatagtatcacctaatggtgggaatactcgt
agtattggcggaggatatactggtggtgctcgtacaagcacaggttcccagcaatcaggt
tttggatttggtagttcccgtagtcaaggcagtagtatctcgacaggaggaagaagtact
gtaacggtaacgtctggactagaagcggcgaaaaaagcagcttcatcccaatctgaccaa
agtggtccagttagctatagtgctggcgatcgagtggcacatggtaaatggggcgaaggt
acggttgtatcggtgaaagggaaagataacgatatggaattgcaaattgctttccctgca
ccagtagggattaagaagttactagcaagttttgcgccgattaggaaagtataa
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