Candidatus Pristimantibacillus lignocellulolyticus: NAG76_08295
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Entry
NAG76_08295 CDS
T09890
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
plig
Candidatus Pristimantibacillus lignocellulolyticus
Pathway
plig03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
plig00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NAG76_08295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
plig03021
]
NAG76_08295
03400 DNA repair and recombination proteins [BR:
plig03400
]
NAG76_08295
Enzymes [BR:
plig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NAG76_08295
Transcription machinery [BR:
plig03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NAG76_08295
DNA repair and recombination proteins [BR:
plig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NAG76_08295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
RAD51D_N
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
URN96216
UniProt:
A0A9J6ZK63
LinkDB
All DBs
Position
1965210..1966154
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AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVELSDGGTYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSVQIDG
VLHEFSTVPGVIEDVTEIILNLKGLSLKIHSDEEKVLEIDADGEGIVTAGDIRADSDVEI
LSPDLHIATLASGARLHMRIFANRGRGYVQADRNKSDDQPIGVIPVDSIYTPITRVNYSV
ENTRVGQVTNYDKLTLEVWTDGSIRPEEAVSLGAKILTEHLDLFVGLTDEAKDAEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELITKSEEDMMKVRNLGRKSLEEVQ
EKLEELGLGLRMDE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
gtgattgagatcgaaaagccgaaaatcgaaaccgtagaattaagcgacggaggcacttat
ggtaaattcgttgttgagccgcttgaacgcggatacggcactacgctgggaaattcgctt
cgtcgaattttgttatcttctttgcctggcgcggcagtaacatccgttcaaatcgacggt
gttctgcatgagttttctacagttccaggagtgattgaagatgtaactgaaatcatcctg
aatttgaaaggactctcgctaaaaatccattcggatgaagaaaaggtattggaaattgat
gctgacggtgaaggtatcgttacagctggtgatattcgtgctgatagcgatgtcgagatt
ttgagccctgatcttcacattgcgactttggcatctggtgctcgtttgcatatgagaatt
ttcgctaaccgcggacgtggttatgtgcaagcagaccggaacaagagcgatgatcaaccg
ataggtgttattcctgtagattcaatctacacgcccattactcgtgttaattatagcgta
gagaatactcgcgtaggtcaagttacaaactatgacaagctaacgcttgaagtttggact
gacggcagtattcgtccagaagaggctgtaagccttggagctaaaatattgacagagcac
ttggacttgttcgttggattaacggatgaagccaaagatgcggaaatcatggttgagaaa
gaagaagataagaaagaaaaagtgcttgagatgactatcgaagagcttgatctttctgtt
cgttcttacaactgtttgaaacgtgcaggtatcaacactgttcaagagctaatcacgaaa
tcggaagaagatatgatgaaggtgcgtaaccttggtcgcaaatctttagaagaagttcaa
gagaagcttgaagagctaggtcttggcttgcgcatggatgagtag
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