Candidatus Pristimantibacillus lignocellulolyticus: NAG76_12530
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Entry
NAG76_12530 CDS
T09890
Name
(GenBank) response regulator transcription factor
KO
K11618
two-component system, NarL family, response regulator LiaR
Organism
plig
Candidatus Pristimantibacillus lignocellulolyticus
Pathway
plig02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
plig00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NAG76_12530
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
plig02022
]
NAG76_12530
Two-component system [BR:
plig02022
]
NarL family
LiaS-LiaR (cell wall stress response)
NAG76_12530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
HTH_23
DUF6115
Sigma70_r4
HTH_24
Motif
Other DBs
NCBI-ProteinID:
URN92679
UniProt:
A0A9J6Z9J9
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All DBs
Position
2969518..2970168
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AA seq
216 aa
AA seq
DB search
MDRPISVLLVDDHEMVRIGLAAVLDTEDGIEVVGEASNGYDGIRMATSYRPDIILMDLVM
EPIDGVETTRQILEVHPDCKVIVLTSFIDDSKLYPVIEAGAFSYLLKTSRATEIADAIRA
AARGQSVIEAQVAAKMMNRLRQPKSEQKQQLHDLLTEREMDVLKSVARGLSNQEIADELF
IGVKTVKFHITNIFNKLEVEDRTQAAIYAHKHGVAE
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggatagaccgatttcggtattattagtagatgatcatgaaatggttagaataggattg
gctgcagtattagatacagaagatggaattgaagtcgtgggtgaagctagtaatggctac
gatggaattcgaatggctacaagctatcgtcctgatattatattaatggatcttgtgatg
gaacctattgatggggtagagacgacaagacaaatacttgaagtgcatcccgattgtaaa
gtaattgtgcttacaagctttattgatgatagtaagctatatccggtaattgaagcggga
gcatttagttatttattgaaaacatcgagagcaacggaaatagcagatgcgattcgtgct
gcagctagaggccaatcggtaatcgaggctcaagttgcagcaaaaatgatgaatcgtcta
cgtcagccaaagagtgaacagaagcaacaattacatgatctgttgactgaacgtgagatg
gatgtattgaaaagtgtagcaagagggttgtcgaaccaagagattgctgacgaattattt
attggggttaagacagtaaagttccatattacgaacatatttaacaaattagaagtagaa
gatcgcactcaagcagctatctatgctcataagcacggagtagctgaataa
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