Candidatus Pristimantibacillus lignocellulolyticus: NAG76_12670
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Entry
NAG76_12670 CDS
T09890
Name
(GenBank) AAA family ATPase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
plig
Candidatus Pristimantibacillus lignocellulolyticus
Pathway
plig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NAG76_12670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plig03400
]
NAG76_12670
Enzymes [BR:
plig01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
NAG76_12670
DNA repair and recombination proteins [BR:
plig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NAG76_12670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
UvrD_C_2
SH3_13
Viral_helicase1
T2SSE
AAA_11
HHH_5
PIF1
ABC_tran
AAA_22
NACHT
ResIII
Motif
Other DBs
NCBI-ProteinID:
URN92707
UniProt:
A0A9J6Z9J4
LinkDB
All DBs
Position
3006913..3009438
Genome browser
AA seq
841 aa
AA seq
DB search
MSWSARPKKQSLPAWLEELEDNQKIKRKVTIGGEVFFDEETNYGAYMCIEEKKKTFTISG
DIPFALQEGQSYLIEGNVILYKNSKQIKIHSIKIEKPTTPEGIIVFLQSLKGLQKRALLL
YETYGVEIIDILVNNPERIANEVSGIGQKQVESWSKQIKVLDGDYDLLAKLMNWGMTLNQ
AKKLIKELGHEVDQVIQKNPYILIRLVKGFGFRKCDQIARELGFDLKGNSRMLAAIRYVL
REASQEGHCYLIRDELLQRVKVTLDIRLTALEMEQLLKQYDGQVNIIYKLSSLSYELNYN
EVAAHYASYKAGGYRLMKLEHRFPVLSFEIDQINQHVQRLIDRMKLVESDGRIYLPEVYQ
SELIVAAKILRIMLHPTINFDGVEDDIQTYLLANQLHLESKQAEAVNHFTEQTGGMYILN
GSAGCGKTFTLKVILSLIEKQYEKMNMPFKVKVFAPTGKASKVAAKATGRECTTIHRGLK
YKPDGGFEHNEKQPLDIDCLVLDESSMLDIVLAKHLFSAIPPHCKVIFMGDTKQLPSVGA
GNVLHDLISSDMIPVITLDVVKRQAEDSGIIINANKIIQGEMIDTSAETLDAYVIYQHEA
ERVQDTIIRSISRLLQTRDLSLEDIQVLCPQRKGEVGTYVMNWMIQQAFNASEETLKVEN
RRIAKQVSGSDEVEEIPLYFKPDDKVIHIANNYQMKWYTKSGSNNYEENSKLVGITNGEC
GVIEEIYKINQQNDEEEFVIVVRYEEGYVKYMNQFDELDHCYAMTIHKSQGSQWPAVLMV
VMMENYNMLDNSIFYTGYTRAKEFSCVIGQSNAIAHAIATFRNQKRNTSLNEKFIVKEDA
E
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgtcatggtctgcgagaccaaagaaacaatcgcttcctgcatggcttgaagagttggaa
gataatcagaaaattaagcgcaaggtaacgataggcggtgaagttttcttcgatgaagaa
acaaactatggagcctatatgtgcatcgaagagaagaaaaagacatttaccatctcaggc
gatatcccttttgctttacaagaaggacagtcttatcttatcgaaggtaatgttatctta
tataaaaatagtaagcaaataaagatccattctattaaaattgaaaagccaacaactcct
gaagggattattgtttttctacaaagtctcaaaggattgcagaagcgtgcactacttcta
tatgaaacctatggagtagagatcattgatattttggtgaacaatccagagcgcattgcc
aacgaggtttctggtataggacagaaacaggtagagagctggagcaagcaaattaaagtg
ctagatggtgactatgatttactagctaagttgatgaactggggcatgacacttaatcaa
gcgaagaagctgatcaaggagctggggcatgaggtagatcaagttattcaaaaaaatcct
tatattctcattcgcttagtcaagggctttggatttcgcaaatgtgatcagatcgcgaga
gagctaggattcgatcttaaaggtaacagccgtatgctggcagcgatacgttatgtactt
agagaagcatcgcaagaaggtcattgctacttaatacgggatgaacttttacaacgagta
aaagttacgttagatattcgacttacagcattagagatggagcaacttcttaagcaatat
gatgggcaagttaatatcatttataagttaagctcattatcgtatgaacttaattataat
gaggttgctgcacattatgcgagctataaagctggtggataccgcctgatgaagctggaa
catcgattccctgtgttgtcatttgagatagatcagattaatcaacatgtgcaacgatta
attgatcgaatgaagcttgtcgagtctgatgggcgaatttacttgccagaagtgtatcaa
tctgaactgatcgttgcagccaaaatattaaggataatgcttcatccaacgatcaatttt
gacggggtagaagacgatatacaaacctatcttctagctaatcagttacatctggaatct
aagcaggcagaagcggttaaccattttacggaacaaactggcggcatgtacattttgaat
ggtagtgctggttgtggtaaaacgtttacgcttaaagtcattctctccttaatcgaaaag
caatatgagaagatgaatatgccattcaaagtaaaggtgtttgcgcctactggaaaggca
tcaaaagtagcagctaaggcgactgggcgagaatgtacgacgattcatcggggtctcaaa
tataaaccagatggtggatttgagcataatgagaagcaaccacttgatattgattgttta
gtgttagatgaaagctctatgctcgatatcgtactagcaaagcatctattcagcgccatt
ccacctcattgtaaagtgatctttatgggagatacgaagcaattaccgagtgtgggagcg
gggaacgtgcttcatgatctcattagtagcgatatgatccctgtcattactctggatgta
gttaagcgtcaagcagaggattcaggaataattattaatgctaacaaaatcattcaaggt
gagatgattgatacaagtgcagaaacattagatgcctacgttatctaccaacatgaagct
gagcgagtacaagatacgattatccgttccattagtagattactgcaaactagagatcta
tcattagaagatatccaggtattatgcccgcagcgtaaaggcgaggtagggacatatgtg
atgaactggatgattcaacaagcttttaatgcaagtgaggaaacgttgaaggttgaaaat
agaaggatagcaaaacaagtaagtggcagtgacgaggtagaagagataccgttgtatttc
aagccagatgataaagttattcatatcgctaacaactatcagatgaaatggtatacaaaa
tctggttctaataactatgaggaaaatagtaaattagttggcataaccaatggtgaatgt
ggagttatcgaagaaatatataagatcaatcagcaaaatgatgaagaagaatttgtgatc
gtcgttcggtatgaagaaggatatgttaagtatatgaaccaatttgatgaactcgatcat
tgttatgctatgaccattcataagtctcaaggctcacaatggcctgccgtcttgatggta
gttatgatggaaaactacaatatgctagacaatagtatattctatactggatacactaga
gcaaaagaattcagttgtgtcattggtcaatctaatgccatcgcccatgcgatagctaca
tttcgtaatcaaaaacgtaatacaagtcttaatgagaaatttatcgttaaggaagatgcg
gaatag
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