Candidatus Pristimantibacillus lignocellulolyticus: NAG76_12740
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Entry
NAG76_12740 CDS
T09890
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
plig
Candidatus Pristimantibacillus lignocellulolyticus
Pathway
plig03420
Nucleotide excision repair
plig03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NAG76_12740
03430 Mismatch repair
NAG76_12740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plig03400
]
NAG76_12740
Enzymes [BR:
plig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NAG76_12740
DNA repair and recombination proteins [BR:
plig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NAG76_12740
MMR (mismatch excision repair)
Other MMR factors
NAG76_12740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
URN92720
UniProt:
A0A9J6Z9U1
LinkDB
All DBs
Position
3023718..3025973
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AA seq
751 aa
AA seq
DB search
MLHAFLQQYKDLVQLNDVQQKAVEHFQGPLLLLASPGSGKTTTIIMRIGYLVSYHKVQAH
QIIAVSFSKASARDMSLRYERFFPELPKVKFSTIHSLAFEIVIQGLRKQGISYEVIDGYD
NKADEELEEQETRLHKNIILRQLYEKLFHEKMKDELLDELLTYISYVKNKMIPQEQWNHI
PCKVKQADELLRMYEQFKQSQQKLLLDFDDMLVYAEKTLREDLAIRNMYKRRYRFMLTDE
SQDTSLIQHHIIALLVEDHHNICVVADDDQSIYSWRGAEPSYLLSFKEHYHSAEIMYMEQ
NYRSSQEIVTVANQFIRKNHNRYAKHMFTKNPARELIHIHDFPTVQEEINYIADALQRSD
QLQEVAVLYRNHYSSIMLVNELDRRGIPFYMKDGDDRFFSHWVVEDILNFMRLSYTDRRM
DIFEKLAMKMNVYLSKQQILQCKQLHEQESIFELLLAKVKLNDYQPELIIRAQQTVQSLR
DVNPVEAIRLIRNDLGYDKAIVGLCERLGFRKEYLMSILNSLEGIAEGQQTLEQFANRLK
QLEQAQKQAKNKKREAVVTLSTLHSAKGLEFNIVYMMDLVQQVIPSRTDQDSAELMEEAT
RLFYVGMTRARHSLHLMTVQKWQNERAKSSEFVQAVKGIQNLLPMMLEQTFSSQIQQKLD
HIVNHQSSTITQFSTVKSVKKINVNAITDANVLETGIVIIHEQFGEGTIEEVQTPKIRIN
FVKHGLKTLQVEMCITQGLLELPKEQKLLNV
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgttacacgcatttttgcaacaatataaagatttggtacaacttaacgacgttcaacaa
aaagctgttgagcattttcaaggtccattattattacttgcatcacctggatcaggaaag
acgactaccattattatgcgaatcggatatctcgttagctatcataaagttcaagcgcac
caaataattgcagttagtttcagcaaagcgtctgctcgtgatatgagcttacgctatgag
cggtttttccctgaactacctaaagtgaaattttctacgatccatagtcttgcatttgaa
attgttatacaaggattacggaaacaggggatatcttatgaagtgatcgatggttatgac
aacaaagcggatgaagaactagaagagcaagaaactagacttcataaaaatataatatta
cgccaattgtatgaaaagttatttcacgaaaaaatgaaagacgaattacttgatgaattg
ttgacatatataagctatgtgaaaaataaaatgatcccgcaggagcaatggaatcatata
ccttgtaaagtgaaacaggcggacgagctcttacgtatgtatgaacaatttaagcaatcg
caacaaaaattattactagattttgatgatatgcttgtctacgccgagaagacattaaga
gaagatcttgctatacgaaatatgtataaacgaagatatcgctttatgttaactgatgaa
agtcaagatacttcacttattcaacatcatattattgcattacttgtagaggatcatcat
aatatttgtgtcgttgccgatgatgatcaatcgatctatagctggaggggagcagaacca
tcttatctgctgtcgttcaaggagcattatcattcagctgaaattatgtatatggagcaa
aactatcgttcttctcaagaaatcgtaacagtagcgaatcaatttatccggaaaaatcat
aatcgatatgctaaacatatgtttactaaaaatcccgccagagaactcattcatattcat
gatttcccaactgtacaagaagaaattaactatatcgccgatgcattgcagcggtctgat
cagttacaagaagttgccgtattatatcgtaatcattattcatctattatgcttgttaat
gaactcgatcgtagaggaattccattctatatgaaggatggagatgatcgtttcttctct
cattgggtagtcgaagatattttgaattttatgagattaagctataccgatcgtagaatg
gatattttcgagaagttggcgatgaaaatgaacgtatacttatcgaaacaacaaatacta
caatgcaaacaattgcatgagcaggaatctatttttgaattgttacttgccaaagtgaaa
ttaaatgactaccaacctgaactcattatccgtgctcagcaaacggtacaatcacttcgt
gatgtaaatcctgtagaagcgattcgtcttattcgcaatgatctaggttatgataaagca
attgttggattatgtgaacgattaggttttcgtaaggaatacttaatgagtattcttaac
agcttagaaggaatagcagaagggcaacaaacactggaacagtttgcgaatagattaaag
caacttgagcaagctcaaaaacaagctaaaaataaaaaacgagaagctgttgtaacattg
tcgacgctacatagcgcaaagggattagaattcaacatcgtctatatgatggatctagtc
caacaagttattccatcacgcacagatcaagatagtgcagaattaatggaagaagccact
cgattattctatgttggaatgacgagagcaaggcatagcctgcatttaatgactgtgcaa
aagtggcaaaatgagcgggcaaaatcatctgagtttgtccaagcggtaaaaggaattcaa
aatttattgccgatgatgttggagcaaacattctcttcgcagattcagcagaagctggat
catattgtgaatcatcaatcgtcgacgattacacaatttagcactgttaaaagtgttaag
aagataaatgtaaatgcaattacagacgctaatgtgttagaaacgggaattgtcattatt
catgaacaatttggtgagggtacgatagaagaagttcaaacaccaaaaattagaattaat
tttgtaaagcatggtttgaaaacactgcaagtagaaatgtgcattactcaaggactatta
gaattaccaaaagaacagaagctattaaatgtttag
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