Pristimantibacillus lignocellulolyticus: NAG76_14715
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Entry
NAG76_14715 CDS
T09890
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
plig
Pristimantibacillus lignocellulolyticus
Brite
KEGG Orthology (KO) [BR:
plig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plig03019
]
NAG76_14715
Messenger RNA biogenesis [BR:
plig03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NAG76_14715
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
URN96849
UniProt:
A0A9J6ZME7
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All DBs
Position
3467577..3468533
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AA seq
318 aa
AA seq
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MILINKLKIHEEFVGFYLLKELEIKQTNTIPAKDYFDIVLLDSSGEISAKYWDVTAQEKE
DIFPMELVKIQGIVQTYREKLQVKVTKIRKAGDDDGISLTDFVKSAPIRSIDLVHTIKNT
VNGIIDRDIKTIVLHCVTKVEDKLMEYPAAKTHHHAYFAGLAYHIVRMLEIGDFICKQRP
FLNDDLIKAGIILHDIAKPEEMNAQLGIVTEYSNQGKLIGHIVMASNWIVEAAIKYDISL
DSNQVLALQHLVLSHHNLGEWGSPVQPQMAEAVALHYIDVLDAKLQMVEDVLDTTSESEL
WTPIIRGLENKSIFRLKL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
attattcttataaataaactgaagattcacgaagagtttgtaggcttttatttgttgaaa
gaacttgagataaaacaaaccaataccatccctgcaaaagactattttgatattgtactt
ttggattcaagtggtgaaatttcggcaaagtattgggatgtgaccgcacaagaaaaagaa
gacatttttcctatggagttagtcaagattcaagggatcgttcaaacttacagggaaaaa
cttcaagtaaaagttactaaaattcgcaaagcaggagatgacgatggtatttctttaacg
gatttcgtaaaatcggcacccatacgttcgattgacctagtacatacaattaagaataca
gttaacggaatcattgatcgggatattaaaactatagtattacattgcgttacaaaagtt
gaagataagctgatggaatatccagcagctaaaactcatcatcacgcatattttgccggg
ctagcatatcatattgtccgcatgttagaaatcggggatttcatttgtaagcaacgaccc
ttcttaaatgacgacttaatcaaagcgggaataattcttcatgacattgctaagcctgaa
gaaatgaatgcacaattaggtattgttacagaatacagtaatcaagggaagcttattggg
catattgttatggcatcaaattggattgttgaagcggctataaaatatgacatttcactt
gattctaatcaagtactcgctttacagcacttagttctctcccatcataatttaggggag
tggggaagtcctgtgcagcctcaaatggctgaagcagttgcacttcattatattgatgta
ctagatgctaagttacaaatggttgaagatgtcttagacaccacatccgaatctgagtta
tggactcctataatcagaggtctagagaataaatcaatatttcgtttaaaactttaa
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