KEGG   Pristimantibacillus lignocellulolyticus: NAG76_16740
Entry
NAG76_16740       CDS       T09890                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
plig  Pristimantibacillus lignocellulolyticus
Pathway
plig03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:plig00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NAG76_16740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:plig03019]
    NAG76_16740
Messenger RNA biogenesis [BR:plig03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     NAG76_16740
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1 Lactamase_B_6 DUF2201
Other DBs
NCBI-ProteinID: URN93466
UniProt: A0A9J6ZBI7
LinkDB
Position
3921432..3923111
AA seq 559 aa
MSKKNNQDKLLVFALGGVGEIGKNMYVVQYNDDIVVVDAGLKFPEEDMLGIDIVIPDVGY
LVEHQDKVRGIIITHGHEDHIGGLSYVLKSLNVPVYATKLTLGLIEVKLKEAGILGDTKR
ILISADSEIQLGTITASFFKTNHSIPDSVGVCLDTPEGTIVHTGDFKFDHTPVNDQFADL
QRIAAIGSKGVLALLSDSTNAERPGYTPSESNVGNELEDIFRKSTQRVVVATFASNVHRI
QQVINASIATRRKIAVVGRSMVNVVTIASELGYLNIPEGMIIEPEEVNRMAADRVVILCT
GSQGEPMSALTRMARSTHRKVDILPGDTVIIAATPIPGNERYVGRTVDELFRLGAHVIYG
PGSVSGVHVSGHGSQEELKLMLNLVKPKYFIPVHGEYRMLRLHADLGEEVGIPPENIFVL
DNGETVEFQGGQAARGPKVQAGRVLIDGLGVGDVGNIVLRDRKLLSQDGILVVVVTLSKA
DGTILSGPDIISRGFVYVRESEGLLDEANRIVTSTLTKLMNDKVNEWASLKTNVKDSLGR
FLYEQTRRRPMILPIIMEV
NT seq 1680 nt   +upstreamnt  +downstreamnt
ttgtcaaaaaagaataaccaagataagttacttgtctttgcactaggcggagtcggcgaa
atcggtaaaaatatgtacgtcgttcaatataacgatgacattgtagtagtagatgcagga
ttgaaattccctgaggaggacatgctcggtattgatatcgtaattccagatgttggatac
ttagtagaacatcaggataaagtacgcggtatcattattactcacggacatgaagaccac
atcggtggtttgtcatatgtattgaaaagcttaaatgttcctgtgtatgcaacaaaatta
acactaggattaatcgaagtgaaattaaaagaagctggaatactaggagatacaaaacgt
attcttattagtgcagatagtgaaatccaacttggaacgatcactgcaagcttcttcaaa
acgaatcacagtattcctgattcagtcggagtatgtttagatacaccagaaggtacgatt
gtacatacaggtgatttcaaatttgatcacacacctgttaatgatcaatttgcagatttg
cagcgtattgcagcgatcggtagcaaaggcgtattagctctactatctgattctacaaat
gctgaacgtccaggatatacaccttctgaaagcaatgtaggtaatgaactagaagatata
ttccgtaaatcaacgcaacgtgttgttgtagctacgtttgcttcaaatgtacatcgcatt
cagcaagtaattaatgcttcgattgcaacacgccgcaaaattgcagtcgtaggtcgtagt
atggtaaatgtcgttacgattgctagtgagctaggctacttgaatattcctgaaggaatg
attattgagcctgaagaagtaaatcgtatggcagctgatcgtgttgtaatcttgtgtact
ggtagtcaaggcgaaccaatgtctgcgcttactcgtatggcacgttcaacacatcgcaaa
gtagatattttacctggagatacggtgatcattgccgcgacgcctatccctggtaatgaa
cgttatgtaggtagaacggtagatgaattgttccgtcttggagcacatgttatctacgga
ccgggatctgtatcaggtgttcacgtatctggtcacggtagtcaagaagaattaaaacta
atgcttaatcttgttaagcctaaatactttattcctgttcacggtgaatatcgtatgctt
cgtcttcatgctgatcttggtgaagaagttggaatccctccagaaaacattttcgtatta
gataatggtgaaactgttgagttccaaggtggccaagctgcacgtggacctaaagttcaa
gcaggtcgtgtacttatcgacggattaggtgtaggtgacgtaggtaatatcgtattacgt
gaccgtaaactactatctcaagatggtattctagtcgttgttgtaacactaagcaaagca
gatggaacaattctatctggtccagatattatttcacgtggttttgtttacgttcgtgag
tccgaaggacttcttgacgaggcaaaccgtatcgtaacttctacacttactaaattaatg
aacgataaagttaatgagtgggcttcattaaaaacaaacgtaaaagattctctaggtaga
ttcctatatgagcaaacacgtcgtcgcccgatgattttaccaattattatggaagtataa

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