Candidatus Pristimantibacillus lignocellulolyticus: NAG76_19235
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Entry
NAG76_19235 CDS
T09890
Name
(GenBank) endonuclease VIII
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
plig
Candidatus Pristimantibacillus lignocellulolyticus
Pathway
plig03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
plig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NAG76_19235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plig03400
]
NAG76_19235
Enzymes [BR:
plig01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NAG76_19235
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NAG76_19235
DNA repair and recombination proteins [BR:
plig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NAG76_19235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
DUF7573
Motif
Other DBs
NCBI-ProteinID:
URN93937
UniProt:
A0A9J6ZDM6
LinkDB
All DBs
Position
complement(4444431..4445237)
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AA seq
268 aa
AA seq
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MYELPELDVIRAVLAEKYAGAPITKIVVNSKALVGKKTKLSDALVHATIWFVERRAGHLI
LHLDTGKRLMIYLHESSRFYGGEAGEPLKSGAHLVLYFNNRYVAFYELADEAIQLLTVRE
VDDQLKICGPDPLDKRFTLSALQLVLGKKRNYLKTLLLDATLMTGIGAIYSDEILFEARL
KPNRKANTLTAVEGEALFTAMQTVLKNAIADGGSKEQALFAQDSFTGSYNDKLKVFQREG
EPCTVCSEPIQQLVVAKQKSYVCPHCQQ
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaattgccagaattagatgttatacgcgctgtattagctgaaaaatatgcagga
gctccaatcacaaaaattgtagtgaatagtaaagctttagtaggtaaaaaaacaaaacta
tccgatgcattagtgcatgcaacgatatggtttgtagaacgccgagcaggtcatctgata
ttacatcttgatacaggtaagcgtcttatgatctacttacatgaaagtagtcgtttttac
ggcggagaagctggcgaaccattgaaatcgggtgcacatttggtattgtactttaataat
agatacgttgctttctatgagcttgctgatgaagctattcaattgttgacagttcgcgaa
gtagatgatcaattaaaaatttgtggaccggacccacttgataaacgctttacattaagt
gccctacaacttgtattagggaaaaaacgtaactatttgaaaactctattgctcgacgct
actttaatgacaggtattggagcgatctatagtgatgagatcttgtttgaagctcgcctg
aaacctaatcgtaaagccaacactttaactgcagttgaaggggaagcgttatttacagct
atgcaaacggttttgaaaaatgcgattgctgatgggggatctaaggagcaagcattgttt
gctcaagactcatttactggtagctataatgataaattgaaagtgtttcaacgtgaagga
gagccatgtacggtctgttcagagccaattcagcaacttgttgtagccaaacaaaaaagt
tatgtgtgtccacactgtcagcaataa
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