Candidatus Pristimantibacillus lignocellulolyticus: NAG76_21320
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Entry
NAG76_21320 CDS
T09890
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
plig
Candidatus Pristimantibacillus lignocellulolyticus
Brite
KEGG Orthology (KO) [BR:
plig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plig03400
]
NAG76_21320 (addB)
Enzymes [BR:
plig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NAG76_21320 (addB)
DNA repair and recombination proteins [BR:
plig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
NAG76_21320 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Motif
Other DBs
NCBI-ProteinID:
URN94330
UniProt:
A0A9J6ZDU7
LinkDB
All DBs
Position
complement(4890075..4893569)
Genome browser
AA seq
1164 aa
AA seq
DB search
MSVRFILGRAGSGKTHYCLEQIRNELKSDPLGSPLILLTPEQASFQMEYELIDQGEPQGM
LRAQALSFRRLAFRVMQETGGTALVPITETGKHMLLYKLVNRYASELQLFKNSEDQAGFI
ERLVNMITEWKRYGVSAEQVQQLIQTDKSEYSQLLQKKLHDMGLLYRYMEQELHHKYVDS
EDYLSYMVQGLPHASSLKGCRVWVDGFHGLTPTEYEALGALMANSAHMTIALTLDREFGI
DEPIDELNLFHQTAETYQRIAQLAEQYGIEIEESIILQSSGVSRFGNVEALAFLEKNYGK
RKVYEPSNTQWSQDSAIQLAASANRRAEIEEIARQLLIQVHEHGYRWRDMAVLVRNLDGY
SDYIELVFRRYQIPFFMDQKQKTLYHPFVEFISSALESIVHGWQYDAMFRCIKTEMLFPQ
DETIPREWFDILENYVLASGINGWKWNDTNYWKALATISLDEEEETAYHISDKAQRELDI
SLAARGSIMPPLEQLSDKLTKASNVRQMCQALYELLDDAQVAQRLERWSDEEQARGNLMM
ARTHRQLWGNVMGLLDELVELAGDEQVSTELFAGMIQAGLDSLQLASIPPSMDQVVIGTM
ERTRLSNVKACYIIGASDGVLPMRLQEDGLLSEADREQLVTDGLAMAPSSRRKLLDERFL
IYQILTRASSKLWISYPLADEEGKSILPSEIIRQIRSQFPMINVQHIAIEPHLRMSEQEQ
RNFLAHPDAAMTYLIVMLREWKQGKKLPSLWWDLYNWYAIRPEYAHKLTALLRSLQFNNI
EMPLQIETARGLYGSQMRMSVSRVERFVSCPFQHFSIYGLRLKERKQYRLEAPDMGQLFH
AALGKLANQLGSSWGRMSHDKVKQEVSLIVDQLVPRLQSQILLSSERFRYIARKLKEIVM
QAAIMLGEHAGRAEFNPVGTEVDFGPNGNMPALQVQLDNGNMLEIVGRIDRIDAAESDQG
LLLRVLDYKSSSKALKLDEVIHGLSLQMLTYLDVLMTHGEGWLKQKVSPAGVLYFHVHNP
LLQVKNRISSEEADDLMLKRYKMKGLLTADTTVVRMMDSELETGYSQILPVAVKKDDSFY
SSASVVSHDQWDMLRGFVKTKIKNIGQEIQEGVVSVEPYQLADRTPCQFCDYKPVCQFDP
VIEGNQYRKLAKTSEDEIWRELGE
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttagatttatcctcggtcgagcaggaagcggtaaaacacattactgcttagaa
caaataagaaatgaattaaagagcgatccactcggttctcccctcattttactgacacca
gagcaagcatcattccaaatggagtatgaattaatagatcagggtgaaccgcaagggatg
ctacgagcgcaggctcttagttttcgtcgactagcatttcgagttatgcaagaaacaggt
ggtactgcgcttgttcccattactgagaccgggaagcatatgcttctatacaaattagtt
aatcgatatgcctcggagcttcaattattcaaaaatagtgaagatcaagcaggttttatc
gagagacttgttaatatgattacggaatggaaacgatatggtgtttccgcggagcaagta
cagcaattaattcaaacggataaatctgaatattcgcaactactgcagaagaaacttcat
gatatgggattgctctatcgatatatggagcaagaactacatcacaagtatgttgactcg
gaagattacttatcttacatggtacagggtctcccgcatgcaagttcattaaagggttgt
agggtatgggtcgatggttttcatggtctgacacctactgaatatgaagcgttaggtgct
cttatggctaatagtgcacatatgacaatcgcattaacacttgatcgagaatttggaata
gatgaaccaattgatgaactgaatttattccatcaaacagctgagacgtatcaaaggatt
gcgcaattagccgagcagtatggaatagaaattgaagagtcgatcattttacaatcttcc
ggtgtttctagatttggaaatgtagaagcacttgcttttttggaaaaaaattatggtaag
cgcaaagtatatgagccttctaatacgcagtggagtcaggattcagctattcaattagca
gcctcggcaaatcggcgagctgaaatcgaagaaatagcaagacaattgttaattcaagtt
catgaacatggttatcgttggcgcgatatggcagtcttagttcgtaacttagatggttat
tctgactatattgaacttgttttccgtcgatatcaaattccattctttatggatcagaag
cagaaaacattatatcatccctttgtagaatttatatcttctgcattagaaagtatcgtt
cacggatggcaatacgatgcgatgttccgctgcattaagacggaaatgctattccctcaa
gatgagaccatacctagggaatggtttgatatactagaaaactatgtgctcgcttccggt
attaatggttggaagtggaacgacaccaactactggaaagcattagctaccatatcgctc
gacgaagaagaagagactgcttatcatatttcggataaagcacaacgtgaactagacatt
tccttggctgctagagggagtattatgcccccactagagcaattatctgataagttaaca
aaagctagtaatgtacgtcagatgtgtcaagcattatatgagctacttgatgatgcacaa
gtcgcacaacgattagagcgttggagtgatgaagagcaagcgcgaggtaacttgatgatg
gctcgtacacatcgacagctctggggtaatgtgatgggtctattagatgaactcgtcgaa
ttagctggagatgagcaagtttcaacagaattatttgctggaatgattcaagctggatta
gatagtttgcaattagcatccattccaccatcaatggatcaagttgtcattggaacgatg
gaaagaactcgtctatctaatgtgaaggcttgctacattattggagcatcagatggtgta
ttgccgatgcgattacaagaagatggattattgtccgaagcagaccgtgaacaattagtt
acagatggtcttgcgatggcacctagttcacgccgcaaattactagatgagcgcttttta
atctatcaaatattaacgagagcttcttctaagttatggataagctatccgttagccgac
gaagaggggaaaagtattttaccctcagagattatcaggcaaatacgatctcaatttccg
atgataaatgttcaacatattgcaattgaacctcatttgagaatgagtgaacaggagcaa
cgtaattttcttgctcacccagatgcggcgatgacgtatctaatcgttatgcttcgtgaa
tggaaacaaggaaagaaactgccttcgttatggtgggatctatataattggtatgctatc
aggcctgaatatgctcataaattaacagcgttgcttcgttcactacaatttaacaatatc
gaaatgccattgcaaatagagacagcaagagggttgtatggctcgcaaatgcggatgagt
gtatcacgtgtcgaacgattcgtatcgtgtccattccagcatttctcgatctatggacta
cgtctgaaggaacggaagcagtatcggctagaggcacccgatatgggacaattattccat
gcagcactcgggaaattagcgaatcaacttggtagtagttggggaagaatgtctcacgat
aaggtgaagcaagaagttagtcttatcgttgatcaacttgtacctagacttcaatcgcaa
atattactaagtagtgagcgattccgctacattgctcgcaaattgaaagagatcgttatg
caagctgcaattatgcttggggaacacgctggacgagctgaatttaaccccgtaggtaca
gaagttgattttggtcctaatggtaatatgcctgcactgcaagttcaacttgataatggc
aatatgttagaaatagtaggtcgtattgacagaatagatgctgccgagagtgatcaaggc
ctgttacttcgtgtgttagattataagtctagtagtaaggctttgaagttggatgaagtt
atacatggtttatcacttcagatgttaacctatctcgatgtattgatgactcatggagaa
ggctggctgaaacagaaagtttcacctgctggagtgctatatttccatgttcataaccca
ctattgcaagtgaaaaatcgaattagtagtgaagaagcagatgatcttatgttgaaacgc
tataagatgaagggtttattgactgctgatacaactgttgttcgtatgatggacagtgag
ctagaaacaggatattcgcaaattctgcctgtagcagtgaagaaagatgatagcttctat
agcagtgcttccgttgtcagtcatgatcagtgggatatgttacgtgggtttgttaaaact
aaaataaagaacataggtcaagaaattcaagaaggtgttgtatctgtagagccatatcag
ttagcagaccgaacaccgtgtcaattttgcgactataaaccagtatgtcagtttgatcca
gtaattgaaggtaatcaatatcgtaaattagctaaaacctccgaggatgagatttggcgt
gagttaggggagtga
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integrated database retrieval system
