Candidatus Pristimantibacillus lignocellulolyticus: NAG76_22140
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Entry
NAG76_22140 CDS
T09890
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
plig
Candidatus Pristimantibacillus lignocellulolyticus
Pathway
plig03030
DNA replication
plig03410
Base excision repair
plig03420
Nucleotide excision repair
plig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NAG76_22140 (polA)
03410 Base excision repair
NAG76_22140 (polA)
03420 Nucleotide excision repair
NAG76_22140 (polA)
03440 Homologous recombination
NAG76_22140 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plig03032
]
NAG76_22140 (polA)
03400 DNA repair and recombination proteins [BR:
plig03400
]
NAG76_22140 (polA)
Enzymes [BR:
plig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NAG76_22140 (polA)
DNA replication proteins [BR:
plig03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NAG76_22140 (polA)
DNA repair and recombination proteins [BR:
plig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NAG76_22140 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NAG76_22140 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
DUF61
XPG_I
Motif
Other DBs
NCBI-ProteinID:
URN94485
UniProt:
A0A9J6ZEJ8
LinkDB
All DBs
Position
complement(5063759..5066437)
Genome browser
AA seq
892 aa
AA seq
DB search
MSKWMLIDGNSITYRAFFAMPPLTNSSGMHTNAIYGFTTMLLKLIEEHKPSHILVAFDAG
KVNFRHEQFEDYKGGRQKTPPELSQQFPILKELITAFGIQQYELSGYEADDIIGTLTKKA
DEQGVEVMVISGDKDMLQLASENVTIALTRKGVSEIELYSPETISEKYGLTPLQIIDLKG
LMGDTSDNIPGVPGVGEKTALKLLHQFPSVEEVLANLDAQKGKLKENLTNNQESAIMSKK
LATIFREVPLEHNEDQMQFNGYDHNQLAEQLQKLEFKSLIERLQLSAESGSSAEEARSAL
ESLRIHVIANDNDASVVNELMQAIEQSAEHGLFIEAIGDNPHQASFEGLSISFQDDVYVI
AKDQLTEPLLQPFCEWLSNEDKPKYGYDLHKSELVLSWIGVKLGGAKFDVQLAAYLLDPT
DGNQLLYTIAERHNVYGLASDDEVYGKGAKLKLPEDEKLFQHLALKARTVEKLVPLLNEE
LEQMSMLSLYYDLEGPLSRILAKMELQGIKVASSELENQGVELEAALKLITASIYELAGM
EFKISSPKQLGEVLFEKLSLPAKKKTKTGYSTDAEVLEELAPYHPIIAHILNFRQLSKLQ
STYVEGLLKEVNPTTGKIHTYYRQTIAATGRLSSQFPNLQNIPIRLEEGRKIRKAFVPSE
AGWTILAADYSQIELRVLAHISGDEKLKEAFIHNMDIHTKTAMDVFGVTAEEVDSNMRRS
AKAVNFGIVYGISDFGLSQNLGITRKEAAQFIEQYFNIFSGVRKYMEDIVAEAKSNGYIL
TLLDRRRYVPDIHSSNFNLRSFAERIAMNTPIQGTAADIIKLAMVRMEQTLKERQLESRM
LLQVHDELVFEVPPHELELMKQLVPQVMSEALQLDVPLRADVSFGNSWYEAK
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatggatgttaattgatggaaatagtattacatatcgtgcattttttgcaatg
ccacctcttacgaattcttcaggcatgcatacaaacgcgatatatggttttacgaccatg
cttttgaagctgattgaagaacataagccaagtcatattcttgtagcatttgacgcaggt
aaagttaactttagacatgaacaattcgaggattataaaggtggacgtcaaaaaactcct
cctgagttatcacaacaatttcctatattaaaagagcttatcacggcttttgggattcag
cagtatgaattgtctggttacgaagccgacgatattattggtactctaacgaaaaaggca
gatgaacaaggtgtagaagtgatggtaatttctggagataaggatatgttacagcttgct
tcagagaatgtcaccattgctcttactcgaaaaggagttagtgagatcgaattatattct
ccagaaacgatttctgagaaatatggattaactccactgcaaattattgatctaaaaggt
ctaatgggcgatacttcagataatattccaggagtacctggtgtaggtgagaaaactgcg
cttaaattattacatcaattccctagcgtggaagaagtattagctaatcttgatgcacaa
aaagggaaattgaaagagaatctaacaaacaatcaagaatcagctattatgagtaagaaa
ttagcgacgatcttccgcgaagttccgcttgaacacaatgaagatcaaatgcaatttaat
ggttacgatcataaccagcttgctgagcaattgcaaaagttagaattcaaatctctcatt
gaacgattacaattatctgctgagagtggttcttctgcggaagaagctcgctctgctctt
gagtcattacgtattcatgtaatcgccaatgacaatgatgcgagtgtagtgaatgagctt
atgcaagcaattgagcaaagtgctgagcatggcttgtttatagaagcaataggagataat
ccacatcaagcaagctttgaaggtttatctatctccttccaagatgatgtgtatgttatt
gcgaaagatcaattgactgagccgcttttacaacctttctgcgagtggctttctaatgaa
gacaagcctaagtacggatacgatcttcacaaatccgaattggttttaagctggattggc
gtgaagcttggtggtgcgaaatttgatgtgcaactggctgcttacttattagatcctact
gacggtaaccaactgctatatacgatagctgagcgacacaacgtatacggactagcttca
gatgatgaagtatatggtaaaggtgcgaagttgaagttacctgaggatgagaagctattc
cagcatcttgcgttgaaagctagaacggtcgaaaaactagttccgctattgaatgaagaa
ttagaacagatgtctatgctttctctatattacgatcttgaagggccattatcacgtatt
cttgcgaagatggagctgcaaggaattaaggtagcaagtagtgaattagaaaatcaaggt
gtcgagcttgaagctgcactgaaactaattacagcgagtatttatgaattagcaggaatg
gaattcaagattagttcaccgaagcaattaggagaagtccttttcgaaaagttatctcta
cctgcaaagaagaaaacaaaaacaggatattctactgatgcagaagtgttagaagaacta
gcaccttaccatccgattattgctcatatcttgaatttcaggcagctttcaaagcttcaa
tcaacttatgttgaaggattattgaaagaggttaaccctacaactggaaagattcatacg
tactatcgtcaaacgatcgctgctacaggtagacttagtagtcagttccctaacctgcaa
aacattccaattagactggaagaaggaagaaagattcgaaaagcatttgttccttctgaa
gccggttggacgatattagcagcggattactcacaaattgagctacgtgtattggctcat
atttcgggcgatgagaaattgaaagaagcgtttattcataatatggatattcatacgaag
acggcgatggatgtatttggcgtaactgctgaagaagtcgacagtaatatgcgtcgttca
gccaaagcggttaatttcggaattgtatatgggattagtgatttcggtctatctcagaat
ttaggaattacgaggaaagaagctgctcaatttattgaacaatatttcaatatctttagt
ggtgtccgcaaatatatggaagatatcgtagcagaggcgaagagcaatggttacatttta
acgttacttgatcgtcgtcgttatgttccagatattcattcttcaaactttaatttacgt
tcattcgctgaacgaattgcaatgaacactccaattcaaggaactgctgctgacatcatt
aaactagcgatggttcgtatggagcaaacgttaaaggaacgtcagttagaaagtcgtatg
ttattacaagtacatgatgaattagtatttgaagttcctccacatgaacttgaactaatg
aaacaattagttccacaagtgatgtcagaggcactacaattagatgtgccacttcgtgct
gatgtaagcttcggcaatagctggtatgaagcgaaatag
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