Pseudomonas lijiangensis: KQP88_01600
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Entry
KQP88_01600 CDS
T08713
Name
(GenBank) RHS repeat protein
Organism
plij
Pseudomonas lijiangensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
TEN_YD-shell
DUF4595
OCRE
Motif
Other DBs
NCBI-ProteinID:
QWU83519
UniProt:
A0ABX8HST5
LinkDB
All DBs
Position
complement(336956..341929)
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AA seq
1657 aa
AA seq
DB search
MSVLMGGFTGALTAKQPDAQAIINDFKKCLADYREHAEAWYGGVLDAEQQFKVGDEVGTA
DKDSKQPNTLYANCPANGKLKLVHSFESARFVPIGNTPVRLVPVEDGVVYGKNEVGQAID
LKIGPSGILEVPGLKPNQQYKITFFPNPTRAQIDSLFNSYQGVIGDLSGWLQTEWSTDFL
PLWQAHSSASMAGKAMQQLESAWKGFLKAIMGLWGDIKGLYDLVAHPRENYEKLKKFFTE
EEIKKIYNASKGAIQTALLIASDEPLMWIYVAAIVAWVKMLPPQTCTEVLAELTTEVLLN
ILIGIVLTGGIGLAVRVSAKGLNAAKNSGKVMKLIEDFTSMLMKISKKNATGHAETAKPL
LLNGNSPMNPARKTSVEIAAPKPAETATAPKRKAPVSGGEVETDAQIHARGKKENATRME
QAEKTDDAAKQSETPAKQPAQCADKTCTNGEPVSMVTGEELLTLTDGELGGLLPLEWTRL
YRSSAVEIDSRLGHGWSHSLSHRLQLDDEGVLWTDNENRQTRFPMPTEQRPAITNSLAQA
AIYLGDAPGELILTQAGAKARFYHFRAGRLTTISDPYDNQVHITYDLVDRIQRIDNGAGR
ALLLRYDDRHIVAVDHQQQRPEYDERGERQDPWLTLQTFVTYGYNDKHQLVSATNAVGET
EHYRYNDQHVILERQMAGGASFFWEWEREGKLSRCVHHWANYSQLEARYEWDDKGTVTVH
NADGSEQVYVHDENARLISETTPDGAQTQKAYDDKGRLIAVKDPLGAITEYQYNDAGRLI
AVIPPEDATIRYNYFDGQLVEVLRGKARWQYDRNEQGDITRQIDPHGNETHYSYDRQGRL
LEIRHPDGSRHQLGWNGLGQLLEERLPDGGQRKYRYDALGRQITRQDETGAITHYQWDAV
NRLSQVTLPGGATRAFAYNPYGRVTAERDELGRITRYEYADNLHLVSRRINPDGSQLRYR
YDNSRLLLTEIENERGERYHLNYYSNGLIQQETGFDGHRTAYEYDLNGQLLKKTEFGDDD
SELVTEYQRDAAGRLLVKTLPDGEQIHYSYDALGRLVNVDDGNWPLAYEYDLQDRLITEH
QGWGTLRYEYDSVGQLKHCRLPDGSKLDYHHHRGGQLSSIDLNGSRLTAHQFSGGRERQR
QQGLLLSQYQYDEQGRLQAHSVSQQDRDLFQRRYAYDANGNLAGIDDSRKGNRSFHYDPL
DRLINVRGNTPETFAHDPAGNLLGQGDLPTANLANVKGNRLLMQGDRHYDYDAYGNQIRE
RRGAGQKLVTEYRYDAQHRLIGVSLPGGSVASYKYDAFGRRIAKTVDGHTTEFLWQGERL
VAESADNRYRSYIYEPGSFRPLAMLDGEGPRKATPFYYQLDHLGTPQELTDYSGEIMWSA
KYRAYGNLAALDIAEIDNPLRFQGQYFDTETGLHYNRHRYYNPGTGRFLTPDPIKLAGGL
NNYRYVPNPTGWVDPLGLSDSCPGSGTALPNNTANATKPDRIPMTQDKYDEIINLEKGNR
PGNVREYLPDEYVNLHEEAFRTQGSSFVVIDDWIELSSYPTFPPRKFVGLPSEMDAVIAK
YKASGGNWQVLNRELNLGSGDLSDKRIYLVKIKPGDPRFKYELPHGNEAGAYPKEWVPGG
ETKSGTKEAALVGSEEINHGKDVNKLLNQFDEWEQLQ
NT seq
4974 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttttgatgggcggattcaccggagccctcacggccaaacagcctgatgctcag
gccatcatcaacgacttcaagaaatgcctggccgattaccgcgaacatgccgaagcctgg
tatggcggcgtgctggatgccgaacagcagttcaaggtgggcgacgaggtcggcactgcg
gacaaggacagcaaacagccaaacaccctgtatgccaactgcccggccaacggcaaactg
aagcttgtacacagcttcgaatcagcgcgctttgtgccgattggcaatacgccggtgcgt
ctggtgcctgtggaagatggagtggtctacggcaaaaacgaagtgggccaggcgatcgat
ctgaaaatcggcccgagcgggattctggaagtccccggcctcaagcctaatcagcaatac
aagatcacctttttcccgaaccctacccgtgcgcagatcgacagcctgttcaactcttat
caaggcgttatcggtgatctgagcggctggctgcaaaccgaatggagcaccgactttttg
cctctatggcaagcgcatagcagcgcgtccatggccggcaaggcgatgcaacaactggag
tctgcctggaaaggcttcctcaaggcgatcatgggcctgtggggcgatatcaagggtctg
tacgacctggttgctcatccccgcgagaactacgaaaagctcaagaagttcttcaccgag
gaagagatcaagaagatctataacgcctccaagggagcgattcagacggccctgctgatc
gccagcgacgaaccactgatgtggatctacgtcgcggcaatcgtggcctgggtcaagatg
ctgccgccacagacctgcacggaagtgctggcggaactgaccaccgaagtgctgctgaac
atcctgatcggtatcgtcctcacgggcggtatcggcctggctgtacgggtcagcgccaaa
ggcctcaatgctgccaaaaacagcggcaaggtcatgaagctgatcgaagacttcacgtcc
atgctgatgaagatcagcaagaagaacgcgaccggccacgcggaaaccgccaagcccctg
ctgctcaatggcaactcgccaatgaacccggcgcgcaagaccagcgttgaaatcgccgcg
cccaaacctgcagaaaccgcgacggcccccaagcgcaaagcacccgtttcaggcggtgaa
gtcgaaaccgatgcgcagattcatgcacgcggcaagaaagaaaatgcaacgcgcatggaa
caggcggaaaagaccgacgacgctgccaagcaatcagaaacgcctgccaagcagcccgcc
cagtgcgcagacaagacctgcaccaacggcgaaccggtatcgatggtgaccggcgaagaa
ctgctgaccctgaccgatggcgagctcggtggtttgctgcctctggagtggacgcgcctg
taccgcagcagtgcggtcgaaatcgatagccgtctgggccatggctggagccattcgctg
tctcatcgtctgcaactggacgatgaaggcgtgctctggacggacaacgaaaaccgtcag
acccgcttcccgatgccgaccgagcaacgtccggccatcaccaacagccttgcccaggcc
gccatttacctcggggatgctcctggcgaactgatcctgacccaggccggggcaaaagca
cgcttctatcacttccgtgccggtcgcctgaccaccatcagtgacccgtacgacaaccag
gtccatatcacgtacgacctggtggaccggattcagcgcatcgacaacggtgctggccgc
gccctgctcttgcgctacgacgaccggcatatcgtcgccgtggatcatcagcaacaacgt
ccggagtatgacgagcgtggcgagcgtcaggacccgtggctgaccctccagacctttgtc
acctacggctacaacgacaagcaccaactcgtctctgccaccaatgcggtgggggaaacc
gagcattaccgctacaacgaccagcacgtcattctggaacggcaaatggccggtggtgcc
agcttcttctgggaatgggagcgcgaaggcaagctctcgcgctgcgtgcatcactgggcc
aactactcgcaactcgaagcgcgttatgagtgggacgacaaaggcacggtcactgtccat
aacgccgacggcagcgaacaggtttacgtgcatgacgaaaatgcccgcctgatcagcgaa
accactcccgatggcgcacaaacccagaaagcctatgacgataaaggccgcctgattgcc
gtaaaagatccgctgggggccattaccgagtatcagtacaacgacgccgggcgcctgatc
gccgtgatcccgccggaagacgcgacgatccgttacaactacttcgacgggcaactggtc
gaggtcctgcgcggcaaagcccgctggcaatatgaccgtaacgaacaaggcgacattacc
cggcagatcgacccccacggcaacgaaacccattacagctacgaccgtcagggccgtctg
ctggaaatccgtcatcccgatggcagccgtcatcaactgggctggaacggtctgggccaa
ttgctggaagaacgcctgcccgacggcggccagcgcaaataccgttatgacgccctcggt
cggcagatcacccgtcaggacgaaaccggtgccatcacccattaccaatgggatgcggtc
aatcgcctgagccaggtcaccttgcccggcggtgccacccgcgccttcgcttacaacccg
tatggccgcgtcaccgccgagcgcgatgagctgggccgtatcacccgttacgaatacgcc
gacaacctgcacctggtcagccgccgcatcaatcccgacggcagccagttgcgctaccgc
tacgacaactcgcgcctgctgctcaccgaaatcgagaacgagcgtggcgagcgttaccac
ctcaattactactcgaatggcctgatccagcaggaaaccggtttcgacggtcaccgcacc
gcgtatgaatacgacctcaacggccagttgctgaagaaaaccgaattcggcgatgacgac
agcgagctggtcaccgagtaccagcgcgatgctgctggccgcctgttggtcaagaccctg
cccgacggcgaacagattcactacagctacgacgcccttggccgcctggtcaatgtcgac
gacggcaactggccgctggcctacgaatacgacctgcaagaccgcctcatcaccgaacac
cagggctggggcaccctgcgctacgagtacgacagcgtcggccagctcaaacactgtcgc
ctgccggatggcagcaagctggactaccaccatcatcgcggcgggcaactgagcagcatc
gacctcaacggttcgcgcctgacggctcaccagttcagtggcggacgggagcggcagcgt
cagcagggtctgttgctcagccagtatcagtacgacgaacaaggtcgcctgcaggctcac
agcgtcagccagcaggatcgtgatctgttccagcgtcgctacgcctacgatgccaacggc
aacctggcggggatcgatgacagccgcaagggcaaccgcagtttccattacgacccgctg
gaccgtctgatcaacgttcgtggcaacacaccggaaaccttcgcccacgacccggccggt
aacctgctgggccagggcgatttgcccacagcaaacctggccaacgtcaaaggcaaccgc
ctgctgatgcaaggcgaccgccattacgactacgacgcctacggcaaccagatccgcgag
cgtcgtggtgccgggcagaaactcgtcaccgaataccgctacgacgcccaacatcgcctg
atcggtgtcagcctaccgggcggcagtgtcgccagctacaaatacgacgccttcgggcgc
cgcatcgccaagaccgtcgacggccacaccaccgaattcctctggcaaggcgaacgcctc
gtcgccgaaagcgccgacaaccgttatcgcagctacatctacgaacccggcagcttccgc
ccgctggccatgctcgacggcgaaggcccacgcaaagccacgccgttctactaccagctc
gaccacctcggcacgccacaggaactcaccgactacagcggcgagatcatgtggtccgcc
aaataccgcgcctacggcaacctcgccgccctggacatcgccgaaatcgacaacccgctg
cgcttccagggtcagtatttcgatacggagacagggttacactacaaccggcatcgctac
tacaatccggggactggacggtttttgacgcctgatccgatcaagctggcgggtgggttg
aataattaccggtatgtgcctaaccctacggggtgggtggatccgttggggttgagtgat
agctgtccaggatcaggaaccgctcttcccaataacactgcgaatgcgacgaagcctgat
cgcatacccatgactcaagataaatacgatgagattatcaatcttgagaaaggaaacagg
cctggtaatgtccgtgaatatttacctgatgaatatgtaaatttacatgaggaagctttt
agaacacagggtagttctttcgttgttattgatgactggatcgaactttctagttaccca
accttcccaccaagaaaatttgttggtttgccatcagaaatggacgctgtaattgccaaa
tacaaggcaagcggggggaattggcaggtattaaatagagagctaaatcttggatctggg
gatctttcagataaaagaatctatctcgtaaaaatcaagcctggcgaccctagattcaaa
tatgagctaccacatggaaatgaggcaggcgcttatcctaaagaatgggtaccaggaggc
gagaccaaaagtggaactaaagaagcggccttggtagggtcggaagaaattaatcacgga
aaagatgtaaacaagctcctaaaccaattcgatgaatgggaacaacttcaatga
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