Pseudomonas lijiangensis: KQP88_02145
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Entry
KQP88_02145 CDS
T08713
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
plij
Pseudomonas lijiangensis
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plij03009
]
KQP88_02145 (dbpA)
Enzymes [BR:
plij01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KQP88_02145 (dbpA)
Ribosome biogenesis [BR:
plij03009
]
Prokaryotic type
rRNA helicases
KQP88_02145 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
CMS1
PRAI
P-loop_SecA
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
QWU83625
LinkDB
All DBs
Position
complement(474770..476149)
Genome browser
AA seq
459 aa
AA seq
DB search
MTNTAFNTLPLSAAMLANLESLGYAQMTPIQAQSLPVILKGMDLIAQAKTGSGKTAAFGI
GLLNPINPRFFGCQALVMCPTRELADQVAKEIRRLARSEDNIKVLTLCGGVPFGPQIGSL
EHGAHIIVGTPGRIQQHLRKGSLVLDGLNTLILDEADRMLDMGFYDAIADIIEQTPQRRQ
TLLFSATYPVGIKQLASKFMRDPQTVKVEALHADSQIEQIFYEISPEQRLEAVVKVLGHF
RPTSCVAFCFTKQQVQEVVDHLTAKGMSAVGLHGDLEQRDRDQVLAMFANRSTSVLVATD
VAARGLDIDALDMVINVELARDSEIHIHRVGRTGRAGETGIAVSLVAPSESQRARAIEEL
QKAPLNWQQYDNLSVKEGGKLLPAMTTLCIGSGRKDKLRPGDILGALTGEAGIPGAQVGK
IAIFDFQAYVAVERSIAQQALERLNNGKIKGKSLRVRIL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
gtgactaacaccgctttcaacactttgcccctgtccgccgccatgctggctaacctggag
tcgcttggttacgcccagatgacgccgattcaggcgcaaagcctgccggtgattctcaag
ggcatggacctgatcgctcaggccaagaccggcagcggcaagaccgccgcctttggtatc
ggtctgctgaacccgatcaacccgcgcttcttcggttgccaggctctggtgatgtgcccg
actcgcgagctggccgatcaggtggccaaggaaattcgtcgtctggcccgctccgaagac
aacatcaaggtactgaccctgtgcggcggcgtacctttcgggccgcagatcggttcgctg
gagcatggcgcgcatatcatcgtcggcacgccgggccgtatccagcagcacctgcgcaag
ggctcgctggtactggacggtctgaacacgctgattctcgatgaagcggaccgcatgctg
gacatgggtttctacgacgccatcgccgacatcatcgagcagactccgcaacgtcgccag
accctgctgttctcggccacctacccggtcggcatcaagcaactggcctcgaaattcatg
cgcgatccgcagaccgtcaaggtcgaggcgctgcatgccgacagccagatcgagcagatt
ttctacgaaatctctccggagcaacgtctggaagccgtggtcaaggtgcttggccatttc
cgcccgacatcctgcgttgcgttctgcttcaccaagcagcaagtgcaggaagtggtggat
cacctgacagccaagggcatgtccgccgtgggcctgcatggcgatctggagcagcgtgac
cgcgatcaggtgctggcgatgttcgccaaccgcagcacttcggtgctggtggccactgac
gtagcggcccgaggtctggatattgatgcgctggacatggtcatcaacgtcgagctggca
cgggattcggaaatccacatccaccgcgtcggtcgtaccggacgcgcgggggaaacaggt
atcgcggtcagccttgtagccccttcggaaagccagcgtgcccgggctatcgaagagttg
cagaaagcgcccctgaactggcagcaatacgacaacctgagcgtcaaggaaggcggcaag
ctgctgccagccatgacgactctgtgcatcggttccggccgcaaggacaagctgcgtcca
ggcgacattctgggtgccttgaccggcgaagccggtattccgggcgcgcaggtcggcaag
atcgccatcttcgacttccaggcctatgtggccgtagagcgcagcatcgcccagcaggcg
ctggagcgtttgaacaatggcaagatcaagggcaagtcgttgcgggttcgtattctttga
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