Pseudomonas lijiangensis: KQP88_02435
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Entry
KQP88_02435 CDS
T08713
Symbol
dgcB
Name
(GenBank) dimethylglycine demethylation protein DgcB
KO
K21834
N,N-dimethylglycine/sarcosine dehydrogenase ferredoxin subunit
Organism
plij
Pseudomonas lijiangensis
Pathway
plij00260
Glycine, serine and threonine metabolism
plij01100
Metabolic pathways
Module
plij_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
KQP88_02435 (dgcB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3483
CCG
Fer4_17
Fer4_8
Fer4_10
Fer4_9
Fer4_7
Fer4_16
Fer4_6
Fer4_2
Fer4
Fer4_4
Fer4_21
Fer4_22
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
QWU83681
UniProt:
A0ABX8HW63
LinkDB
All DBs
Position
537548..539509
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AA seq
653 aa
AA seq
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MLNTLLPLLLFTALALAVLGALRRVKMWRNGRASKVDLLGGLLAMPKRYMVDLHHVVARD
KYIANTHVATAGGAVASIVLAILVHGFGLHNRFLGYALLLMSAVMFVGAVFVFRRRLNPP
SRLSKGPWMRLPKSLMAFSVSFFLVTLPVAGILPENFGGWLLAVILGVGVLWGVSELFFG
MTWGGPMKHAFAGALHLAWHRRAERFGGGRSTGLKPLDLTDPSAPLGVEKPEDFTWNQLL
GFDACVQCGKCEAACPAFAAGQPLNPKKLIQDMVVGLAGGTDAKFAGSPYPSLDGKGKPI
GEHGGNPHQPIVNGLVDAETLWSCTTCRACVEECPMMIEHVDAIVDMRRHLTLEKGATPN
KGAEVLDNLIATDNPGGFAPGGRMNWAADLNLSLLSEKKTTDVLFWVGDGAFDMRNQRTL
RAFVKVLKAAKVDFAVLGLEERDSGDVARRLGDEATFQMLARRNIQTLSRYSFKRIVTCD
PHSFHVLKNEYGALGGDYLVQHHSTYMAELLQCGTLKLGQHKGSSVTYHDPCYLGRYNGE
YEAPREVLRALGIEIKEMQRSGFRSRCCGGGGGAPITDIPGKQRIPDMRMEDIRETGAEL
VAVGCPQCTAMLEGVVEPRPMIKDIAELVADALIEEPVVSKSEPVRREPAEVH
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacacccttcttcccctcctgctattcacagccctggcccttgcggtgctgggt
gctttgcggcgggtaaaaatgtggcgcaatggtcgagcctccaaggtcgatctgctgggc
gggctgctggccatgcccaagcgttacatggtcgatctgcaccatgtcgtcgcccgggac
aaatacatcgccaatacccacgtcgccacggcaggtggtgcggtggcgtctatcgtgctg
gcgattctggtgcatggcttcggtctgcataaccgcttcctgggctatgcgctgctgctg
atgtcggcggtgatgttcgtgggggcggtgtttgtctttcgtcgtcgtctcaatccgcca
tcgcgcctgtccaaaggcccttggatgcgcttgccgaaaagcctgatggcgttttccgtc
agcttctttctggtgaccttgccggttgcgggaattcttcccgagaacttcggtggttgg
ctgctggccgtgattctgggcgttggcgtgctgtggggcgtcagcgaactgtttttcggc
atgacctggggcgggccgatgaagcacgccttcgctggcgccctgcacctggcctggcac
cgacgtgccgagcgcttcggtggtggtcgttccaccggtttgaagccgctggaccttact
gacccaagcgcgccgctgggtgtggaaaagcccgaagatttcacctggaaccagttgctg
ggttttgacgcctgtgtgcagtgcggcaaatgcgaagccgcttgtccggcgttcgctgcc
ggccagcccttgaaccccaagaagctgattcaggacatggtggtcggcctcgctggcggc
accgatgccaaattcgcaggcagcccttatccatccctcgacggcaagggcaagcccatc
ggcgaacatggtggcaatccgcatcagcccatcgtcaacggactggtggacgcggaaacc
ctgtggtcctgcaccacttgccgggcatgcgtggaagagtgcccgatgatgatcgagcac
gtggacgccatcgtcgacatgcgccgccacctgaccctggaaaaaggcgcgacccctaac
aagggcgccgaagtgctggataacctgattgccaccgacaaccctggcggttttgcgccg
ggcggtcggatgaactgggcggcggatttgaacctcagcctgctcagcgaaaagaaaaca
accgatgtgctgttctgggtaggtgatggcgctttcgatatgcgtaaccagcgcacgttg
cgggcgttcgtcaaagtcctgaaagccgcgaaggtcgactttgccgtgctgggtcttgaa
gagcgcgacagcggcgatgtggcccgtcgcctgggcgatgaagcgactttccagatgctg
gccaggcgcaacatccagacgctgtccagatacagcttcaagcgcatcgtcacctgcgac
ccccatagctttcatgtgctgaaaaacgagtacggcgccctgggtggtgactacctcgtg
cagcatcacagtacttacatggctgaactgcttcagtgcggcacgctcaagctcgggcaa
cacaaaggttccagcgtgacgtatcacgatccgtgctatctgggccgttacaacggcgag
tacgaagcgccgcgcgaggtattgcgcgccctgggtatcgagatcaaggaaatgcagcgc
tcgggcttccgttcccgctgctgtggtggcggtggcggcgcgcccattaccgatattccc
ggcaagcagcggattcccgacatgcgtatggaagacatccgcgaaaccggtgccgaactg
gtggcagtcggttgtccacaatgcacggcgatgcttgaaggcgtggtcgagccacgaccg
atgatcaaggacattgccgagctggtggccgacgccttgattgaagagccggtagtcagc
aagtcagagcctgtaagacgtgaaccagcggaggtgcattga
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