Pseudomonas lijiangensis: KQP88_02700
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Entry
KQP88_02700 CDS
T08713
Symbol
rsgA
Name
(GenBank) small ribosomal subunit biogenesis GTPase RsgA
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
plij
Pseudomonas lijiangensis
Pathway
plij00730
Thiamine metabolism
plij01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
KQP88_02700 (rsgA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plij03009
]
KQP88_02700 (rsgA)
Enzymes [BR:
plij01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
KQP88_02700 (rsgA)
Ribosome biogenesis [BR:
plij03009
]
Prokaryotic type
GTPases
KQP88_02700 (rsgA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
GTP_EFTU
FeoB_N
AAA_16
nSTAND1
ABC_tran
AAA_29
AIG1
AAA_22
EutK_C
Septin
DUF815
Roc
AAA_7
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
QWU83730
LinkDB
All DBs
Position
complement(612334..613365)
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AA seq
343 aa
AA seq
DB search
MAKRQLNRRQNWRIEKIQGERAARAAKRETQALETLEGGDLGPEQTGLVIAHFGVQVEVE
AQDGEQRGQVFRCHLRANLPALVTGDQVVWRAGNQGIGVIVAQLPRTTELCRPDTRGQLK
PVAANVDLIVIVFAPMPEPHANLIDRYLVAAEHAGIHPLLLLNKADLIDEQNAPALNALL
AVYRTLGYPVMEVSAHHGDGMQQLQNRLDGHISVFVGQSGVGKSSLVNSLLPEVETRVGP
LSELSGQGTHTTTTARLFHFPRGGDLIDSPGIREFGLGHVSRADVEAGFIEFNDLIGTCR
FRDCKHDREPGCALLKALEDGRVQQQRMNSYRSIIASLPQDSY
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacgccaactcaatcgccgccagaactggcgcatcgaaaagatccagggcgag
cgcgctgcccgcgctgcaaaacgcgagacgcaggctctggaaaccctggagggcggcgac
ctcggccccgagcagaccgggcttgtgatcgctcacttcggtgtgcaggttgaagtcgaa
gcccaggacggcgaacagcgtggccaggttttccgctgccacttgcgcgccaacctgcca
gcgctggtgaccggcgaccaggtggtctggcgtgccggcaaccagggcattggcgttatc
gttgcccaactgccccgcaccaccgaactctgccgaccggacacccgcggccagctcaag
ccggtagccgccaacgtcgacctgatcgtgattgtcttcgcgccgatgcccgagcctcac
gccaacctgatcgaccgctatctggtggctgccgaacatgcaggcattcacccgttgctg
ctgctcaacaaggcagacctgatcgacgagcagaacgctccggcgctcaacgccctgctg
gcggtgtaccgcacactgggttatccggtcatggaagtgtcggcgcaccatggcgatggc
atgcaacagttgcagaaccgcctcgacggccatatcagcgtattcgtgggccagtcgggc
gtgggcaagtcttcgctggtcaacagcctgctgccggaagtcgagacacgtgtcggcccg
ctgtcggagctgtccggccagggtacgcacaccacgaccaccgcccgcctgttccacttc
ccccgtggcggcgacctgatcgactcgccgggcattcgcgaattcggcctgggtcatgtc
agccgtgccgatgtggaagccggtttcatcgagttcaacgacctgatcggcacctgccgc
ttccgcgactgcaagcatgaccgcgaaccgggttgtgccctgctcaaggctctggaagat
ggccgggttcagcagcagcgcatgaacagttaccgctcgatcatcgccagtctgccgcaa
gacagttactga
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