Pseudomonas lijiangensis: KQP88_03320
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Entry
KQP88_03320 CDS
T08713
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
plij
Pseudomonas lijiangensis
Pathway
plij03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KQP88_03320 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plij03400
]
KQP88_03320 (recC)
Enzymes [BR:
plij01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KQP88_03320 (recC)
DNA repair and recombination proteins [BR:
plij03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KQP88_03320 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
RIH_assoc
Motif
Other DBs
NCBI-ProteinID:
QWU83841
LinkDB
All DBs
Position
755288..758764
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AA seq
1158 aa
AA seq
DB search
MSVTTSLSAGFMVVHGNRPDELRSLVVSWMRRYPLAPLENEIALVQSNGIAQWLKLALAE
DAQDEDQGGCGIAAAIDVQLPGSFMWQLYRSVLGRNEIPEVSLLDKAPLTWRLMRLLPQL
INQPHFEPLQRFLTDDTDLRKRYQLSERLADLFDQYQVYRADWLKDWAEGRHQLLNVRGE
AKPLSAANCWQAELWRALLDDVGAEGMAQSRAGVHQRFLARINTLDEAPPGLPARVIVFG
ISSLPAQALEALAGLSKFSQVLLCVHNPCRHHWADIVADKDLLRHQYKRQARKNGMPMAL
DPEALHQHAHPLLAAWGKQGRDYINLLDSHDEPNSYRSSFKDERIDLFSESEPTTLLNQL
QDDILELRPLDETREHWPAVDSLKDRSIRFHVAHSAQREVEVLHDQLLARFSRDPGLRPR
DVIVMVPDIDSYAPHIRAVFGQIDSHDQRFIPFTLADQGQRGREPLLIAVEHLLKLPDSR
FPVSEILDLLDVPALRARFKIQEHDLPTLHRWIEGAGVRWGLNARQRAGLGLPDELEQNS
WHFGLRRMLLGYAVGAGEAYEGIEPYDEIGGLDAALIGPLVALIDALQVTHAELSLPATP
EQWGARLQALLQVFFQAESEHDDYLLGQLEMLRETWLKTCETVDLFDELPLTVVREAWLA
GLDKGRLSQRFLAGSVNFCTLMPMRAIPFKVVCLLGMNDGDYPRAQPPLDFDLMGCDYRP
GDRSRREDDRYLLLEALLSARDQLYISWVGHSIRDNSDRPASVLIGQLRDHLASGWKLAT
DEEPDSKQDPGERLLDALTLHHPLQPFSASYFHADTGYFSFAQEWRLLHEDKAAPVSAAA
LPPHEQDEPLTIAQLQDFLRNPVKHFFSQRLKIYFETAEAPVPDEEPFVLDALERYGLSE
SLLAAAMASPDDIEGALQAQALKLQSSGLLPMAGFGTRLQAELIEPLPDVLMRYQALLAL
WPEALSSALPVSFTHNDVSLEGWLGGLHSNGQGQLLTVTVIPNSIGSKRTRKWHRLIRPW
VTHLVASACGLPLNTALVATDDTLLLAPLEQDAASAILSDLLTTWMFGMQQPLPVAVKTA
FAWLGQPLDKAEAAARKAYEGDGVTSNGELGESTALARQFPDFNALMDSEEFVGWCEALY
KPIYEAPWQSLSGGEASA
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcacaacctctctgagcgccggcttcatggtggttcatggcaaccgcccggat
gaactgcgcagtctggttgtctcctggatgcgacgctatcccctggctcctctggaaaac
gaaattgccctggtacaaagcaacggcatcgcccagtggctcaagctggcattggctgaa
gatgcccaggatgaagaccagggtggctgcggtattgcggctgcgatagatgttcaactg
cccggcagtttcatgtggcagctgtatcgctccgtattgggccgcaatgaaatcccggaa
gtctccttgctcgacaaggctccgctgacatggcgcctgatgcgcctcctgccgcaactg
atcaatcagccccatttcgagcccttgcagcgcttcctcactgacgacacggacctgcgc
aagcgctaccagttgtccgagcgtctggctgatctgttcgaccaatatcaggtgtaccgt
gccgactggctgaaggactgggcggaaggtcgtcatcaactgctcaatgtccgaggtgaa
gccaagccgctgagtgccgccaattgctggcaggccgagctgtggcgtgcgctgctggac
gatgttggtgccgaaggcatggcccagagccgtgccggtgttcatcagcgctttctggcg
cgtatcaacacccttgacgaggctccgcctggcttgcctgcacgagtgatcgttttcggt
atttcgtccctgcctgctcaggcactggaagctctggccggtctatcgaagttcagccag
gtgctgctttgcgtacacaacccttgtcgccatcactgggccgatatcgtcgccgacaag
gacttgcttcgccatcagtacaaacgtcaggcacgcaagaacggcatgccaatggcgctt
gatccagaggctttgcatcagcacgcgcatccgctgctcgcggcctggggcaagcagggt
cgcgactacatcaacctgctcgacagccatgacgaacccaacagctaccgctcctctttc
aaggatgagcgcatcgacctgttcagcgagagcgagccgacaaccctgctcaaccagttg
caggatgacattctcgaactccggcctctcgacgaaacccgcgaacactggcccgctgtc
gactccctgaaggatcgctcgatccgttttcacgtagcccacagtgcccagcgtgaagtg
gaggtgctgcacgatcagctactggcacgtttcagccgggacccaggcctcaggccacgg
gatgtgattgtcatggtccccgacatcgacagttatgccccgcatatccgggccgtgttc
gggcagatcgactcccatgaccagcgcttcattcccttcaccctggccgaccagggccaa
cgcggccgtgagccgctgctgattgcggtcgagcatctgttgaagctccccgacagccgc
tttccggtcagcgaaatcctcgacctgctggacgttcctgccttgcgggcacgcttcaag
attcaggaacatgacttgccgaccctgcatcgctggatcgaaggcgccggggtacgctgg
gggctgaatgcacgacagcgtgccggcctgggattgcccgacgagctggaacagaacagc
tggcatttcggtctgcgtcgaatgttgctgggctatgccgttggggcgggtgaagcttat
gaaggtatcgaaccctatgacgaaatcggcgggctggatgctgcactgatcggcccactg
gttgccttgatcgacgccttgcaggttacccacgccgaactgtccctgcccgcgaccccc
gagcaatggggcgcacgtttgcaggctctgttgcaggtgtttttccaggccgaaagcgaa
catgacgattacctgctgggtcagcttgagatgcttcgagaaacctggctgaagacctgt
gaaacagtggacttgttcgatgagttgccactgaccgtcgtgcgtgaagcctggctggcc
ggtctggacaagggccgtctgtcacagcgctttctggcgggctcggtcaacttctgcacc
ttgatgcctatgcgtgcgattcctttcaaagtagtctgcctgctgggcatgaacgacggc
gattaccctcgcgcccagccgccactggacttcgacctgatgggctgcgactaccgcccc
ggtgaccgttcgcggcgtgaagatgatcgttacctgttgctcgaagcgctgctctcggca
cgggaccagttgtatatcagttgggtcggccacagcattcgcgacaacagcgaccgcccg
gcttcggtgttgatcggccagttgcgcgatcacctggccagcggctggaaactggccact
gacgaagagcctgacagcaaacaagacccgggcgaacgcctgctcgatgccttgaccctg
catcacccgctacagccgttcagtgccagttatttccatgccgacaccggctacttcagc
tttgcccaggaatggcggctgctgcatgaagacaaggcagctccggtcagcgcggcggcc
ttgccacctcacgagcaggatgaacccctgacgattgcgcagttgcaggacttcctgaga
aatccggtaaagcactttttcagtcagcgcctgaagatctactttgaaaccgctgaagcg
ccggtgccagatgaagaacctttcgtgctcgacgcacttgagcgttacggtcttagcgaa
agcctgctggccgccgccatggccagcccggacgatatcgaaggggcgttgcaggctcag
gcactcaagctgcaaagcagtggtctgttgcccatggccggtttcggcactcgcctgcag
gccgagttgatcgagccactgcctgatgtgctcatgcgctatcaggcgttgctggccctg
tggcccgaggcgttgagcagtgccttgccggtgagctttacccataacgacgtgagtctc
gaaggctggctcggcggcctgcacagcaatgggcaaggccagttgctgaccgtaacggtc
atccccaacagcattggctcgaaaagaacccgcaaatggcatcgactgattcgtccctgg
gtcactcatctggtcgccagtgcttgtggcttgccgctcaatacggcgctggtggccacg
gatgacacgctattgctggctccgctggagcaggacgccgccagcgcaatcctcagcgat
cttctgaccacctggatgttcggcatgcagcaacctctgccggtagcggtcaagaccgcc
tttgcctggctggggcaaccactggacaaggccgaggccgctgcacgcaaggcgtatgaa
ggcgatggggtcaccagtaacggtgagctaggtgaaagcaccgcgttggcccggcagttc
ccggacttcaatgcgttgatggacagcgaagagttcgtcggctggtgtgaagcgctctac
aaacctatttacgaagcaccctggcagtctctgtccggcggggaggccagcgcatga
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