KEGG   Pseudomonas lijiangensis: KQP88_03650
Entry
KQP88_03650       CDS       T08713                                 
Name
(GenBank) type I restriction endonuclease subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
plij  Pseudomonas lijiangensis
Brite
KEGG Orthology (KO) [BR:plij00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:plij02048]
    KQP88_03650
Enzymes [BR:plij01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     KQP88_03650
Prokaryotic defense system [BR:plij02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   KQP88_03650
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII T1R_D3-like HSDR_N_2 SNF2-rel_dom T1RH-like_C SCGB3A
Other DBs
NCBI-ProteinID: QWU83899
LinkDB
Position
complement(835226..838552)
AA seq 1108 aa
MGWELEDVEKPFVAQLQGLNWKHIQGSLDDPAITGRKSFSEVIQRAALAERLCAINLRDG
QPWLDEQRIAEALAAITRVGAGKLMEANQTVTELLLKGITVEGLPGWEGGRGQTIQYIDW
ATPANNHFSVINQFRVDCPPGYNSGKKFIVPDLVLLANGIPLVLVECKSPSIPEPLAEAV
DQLRRYSNQRKAAFEVEENEGNETLFASVQLLVASSYDEARVGCIGAGFGHFSQWKTVVG
PDGNGSEQSVAEQLGKAKLSEQERLVAGMLTPAHLLDLIRHFMLFMQVGGQTIKTVCRYQ
QYRAVNRTVTRMKRGQTRLEHGESDQRGGIVWHTQGSGKSLTMVFLVRKMRTDTQLRRFK
IIVVTDRKDLQNQLAATATLSGELPEVASSIQGVKALARRQGPGLVFATIQKYRNSEQEE
DGEAPIPVQAAAPLKAAEKRAPYLVNKPFEVLNHDESILVLIDEAHRTQAGDLHANLLAG
LPNCVRIGFTGTPIIMGDKKRTHEIFGAFIDKYTIKEAEADGATVPVLYEGRTAQGAVKD
GASLDELFEDLFREHSQDELELIKKKYATKGHIFDAPALIADKARDILRHYVTNILPNGY
KAQVVAYSRIAAIRYFHALQAARDQLLAEAEALPATDKDLDDEALCQRPPKLQARVQAWR
YRDRLRNLEFAPIISGSNNDPTEWKTWTDASKHEQLIQRFKKPLSHEQPGKADPLAFLIV
KSMLLTGFDAPIEGVMYLDRPIKEAELLQAIARVNRTGFGKRCGIVVDYYGVANHLREAL
AAYADEDIEGALSSIKDEVPVLRDRHLRVVDVLRRQGIESLEDAEACIAALESEKVRAEF
AVKLKAFLDSLDTVLPRPEGLPFVKDAKRLAYIHARARGRYKDLPQLGKDVGAKVRKLID
DHVISLGIDPKIPPIQLTDADFEKQLSRSVNDRAKASEMEHAIRSHVRKHADEDPVLYRK
LSERLNELLKSLGAQWDQLVEQMQKIINELRSGQMSDDYSPLDLPEHYAPFLRTLLDVVC
ADANPQPAELLCLKDVTVELVDLLVGELQSHRDIWSPRKRAAQEELAGQLFDYLMRLRPP
LVDSDTAGVLSDRLMDQARASHDRLMQL
NT seq 3327 nt   +upstreamnt  +downstreamnt
gtgggctgggaattggaagacgtcgaaaaaccctttgtggctcagttacaggggctgaac
tggaagcatatccagggcagcctcgacgacccggccatcactggccgcaaaagcttcagt
gaagtgattcagcgggccgcactggccgagcgcttgtgtgccatcaacctgcgcgacggt
cagccctggctggatgaacagcgcattgccgaagcactggcggcaattacccgcgtgggc
gccggcaagttgatggaagccaaccaaacagtcactgagctgttgctcaaaggcatcact
gtcgaaggtctcccaggctgggaaggcgggcgtggccagaccatccagtacatcgactgg
gccaccccggccaataaccacttcagtgtgatcaaccagttccgagtggattgcccgcca
gggtataacagcggcaagaaatttatcgtcccggatctggtgttgctggcgaacggcatc
ccgctggtgttggtggagtgcaagagcccctcgattccagaaccgcttgccgaggctgtc
gatcaattacgtcgttacagcaaccagcgcaaggcggccttcgaggtcgaggagaacgag
ggcaacgagactctgttcgccagtgtgcagctattggtcgccagtagctacgacgaagca
cgggtgggctgcattggtgctggcttcgggcatttctcccaatggaagaccgtggttggc
ccggatggcaacggcagcgagcagtcagtagccgagcagttgggcaaagccaaactgtcc
gagcaggaacgcttggtggcaggcatgctcacgccagcccacctgctcgatctgatacga
catttcatgctctttatgcaggttggcgggcagaccatcaagacggtctgccgctaccag
caataccgcgcggtgaaccgcacagtgacccgcatgaaacgcgggcagacacgtcttgag
catggcgagagtgaccaacgcggcggcatcgtttggcacactcaaggctcgggcaaaagc
ctgaccatggtatttctggtgcgcaagatgcgcacggatacacaactgcgccgcttcaag
atcatcgtggtcaccgaccgtaaagacctgcaaaatcagctcgccgccactgccacactg
agcggcgagctgccggaggtggcctccagtattcagggtgtcaaggccttggcacgtcgc
cagggccccggcttggtattcgccaccatccaaaagtatcgaaattccgagcaggaggaa
gatggggaggcgccgatccctgtgcaagctgcggcccccctcaaagccgcagaaaagcgc
gccccctatcttgtgaacaaaccgttcgaggtgctcaaccacgacgagagcattctggta
ttgatcgatgaggcgcaccgcacccaggccggcgatctgcacgcgaacctgctggcaggc
ctgcccaactgcgtgcgcatcggttttaccggtacaccgatcatcatgggcgataaaaaa
cgcacccacgaaatcttcggcgcgttcatcgataaatacaccatcaaggaagccgaggca
gatggcgcgacggtgccggtgctttacgaagggcgcactgcccaaggcgcggtgaaagat
ggggcgagcctggatgaactgttcgaggatttgttccgtgagcacagtcaggacgagctg
gagctgatcaagaaaaaatacgccaccaaaggccatatctttgatgcccccgcgctgatc
gctgataaggcgcgcgacatcctcagacattacgtcaccaatattctgcccaatggctac
aaggcgcaggttgtagcctatagccggattgcggcaatccgctatttccacgcgctgcag
gccgcccgcgatcagttgctggccgaggccgaagcgttaccagcaaccgacaaggacctc
gacgatgaagcactgtgccagcgtccacccaagctgcaggcgcgcgtgcaggcgtggcgc
tatcgcgacaggctacgcaacctggagttcgcgccgattatttccggctcaaataacgat
ccgaccgagtggaaaacttggacggatgccagcaagcacgagcagttgatccagcgcttc
aagaagcccctgagccatgagcagccgggcaaggccgacccgctggctttcctgatcgtt
aagtctatgctgctcactggctttgacgcccccatcgaaggggtcatgtaccttgaccgg
ccaatcaaggaagccgagctgctgcaagccattgcgcgggtcaaccgtactggtttcggc
aagcgctgtggcatagtggtcgactactacggggtcgccaaccacctgcgcgaagccctg
gcagcctatgccgacgaggatatcgaaggtgcgctgagcagcatcaaggacgaggtgccg
gtattgcgagatcgtcatctgcgtgtggtggatgtgctacgtcgccagggcatcgaatcg
ctggaagatgccgaagcctgcattgccgcactggagtcggaaaaggtgcgcgccgaattt
gcggtaaagctcaaagcgtttctcgactcattggacaccgtactgccacgccccgagggc
ctgcccttcgtcaaagatgccaagcgtctggcctatatccatgcacgagcgcgcgggcgc
tacaaggacctgccacaactgggcaaggatgtcggtgccaaggtgcgcaagctgatcgac
gatcacgttatttcgctgggcatcgacccgaagattccgccgatccagctcaccgatgca
gacttcgagaaacagttgtctcgtagcgtcaacgaccgcgccaaggcctcagagatggag
cacgccattcgctcgcatgtgcgcaagcatgctgatgaagatccggtgctttatcgcaag
ctgtctgaacgcctgaacgagctgctcaagtcgctgggcgcgcagtgggatcagttggtt
gaacagatgcagaagatcatcaacgagctgcgcagcggtcaaatgagcgatgactacagc
cccctggatctgcccgagcactatgcacccttcctgcgcaccctgctggatgtggtgtgt
gccgacgccaatccgcagcccgccgagctgctgtgtttgaaggatgtgacagtggaactg
gtcgatttgttggtgggcgaactccaaagccaccgcgatatctggagcccgcgcaagcga
gcggcacaggaggaactagccgggcagctattcgattacctgatgcggctacgtcctccc
ttggtggacagcgatacggcgggtgtactgtctgaccggctgatggaccaagcgagagct
agccatgatcggttgatgcaactgtga

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