Pseudomonas lijiangensis: KQP88_03850
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Entry
KQP88_03850 CDS
T08713
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
plij
Pseudomonas lijiangensis
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
plij03016
]
KQP88_03850 (truB)
Enzymes [BR:
plij01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KQP88_03850 (truB)
Transfer RNA biogenesis [BR:
plij03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KQP88_03850 (truB)
Prokaryotic type
KQP88_03850 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
QWU83933
LinkDB
All DBs
Position
881163..882080
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AA seq
305 aa
AA seq
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MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKSYETLMQLGKTTTTADSEGEVLQTRPVTVGREDIEAVLPEFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLACESETARLSVDCSKGTYI
RTLVEDIGEKLGCGAYVAELRRTQAGPFNLSQTVTLEELEQVHADGGNEAVDRFLMPSDS
GLLHWPLLQFSEHSSFYWLHGQPVRAPDAPKFGMVRVQDHEGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaagcgtatacgccgcaacgtcagcggaatcatcctgctcgacaagcca
ctgggttttacttccaatgcggccctgcaaaaggtgcgctggttgctcaatgccgaaaag
gccgggcataccggcagcctcgacccactggcgacaggtgtgttgccgttgtgtttcggt
gaagccaccaagttctctcagtacctgctcgattcggacaagtcctacgagacgctgatg
caactgggcaagaccaccaccacggccgactccgaaggcgaagtgttgcagactcgcccg
gtgaccgttggtcgtgaagatatcgaagcggtattgccggaatttcgcgggcaaatcagc
cagatacctccgatgtactcggctctcaagcgtgatggccagcctctttacaagctggct
cgtgcaggtgaagtagtggagcgcgagcctcgttctgttactattgcgcgcctggaattg
ctggcttgcgagtccgagactgcgcgtctttcggtcgattgcagcaaaggcacctatatt
cggaccctggtcgaggatatcggtgagaaactgggctgtggagcctatgttgcagagctg
cgccgtacccaggccgggcctttcaacctgagccagacggtcacgctggaagagcttgag
caggtccacgccgacggtggcaacgaagcggtcgaccgtttcctgatgccatctgacagc
ggtctgctacattggccattgctgcagttttcggaacacagttctttctactggctgcat
ggtcagccggtaagagcaccggatgcgccgaagttcggcatggtccgggtgcaggatcac
gaaggtcgcttcatcggtatcggtgaagtaagcgaagacgggcgtatagcgccgcgtcgt
ctgattcggtcagaatga
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