Pseudomonas lijiangensis: KQP88_03925
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Entry
KQP88_03925 CDS
T08713
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
plij
Pseudomonas lijiangensis
Pathway
plij03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KQP88_03925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plij03019
]
KQP88_03925
Enzymes [BR:
plij01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
KQP88_03925
Messenger RNA biogenesis [BR:
plij03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KQP88_03925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
BenE
Motif
Other DBs
NCBI-ProteinID:
QWU83947
LinkDB
All DBs
Position
complement(898986..900383)
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AA seq
465 aa
AA seq
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MLKKLFQSFRSPVRKPQQHTRTTPEVLNSSQHSLQRSQFSRHAVNIVERLQNAGYQAYLV
GGCVRDLMLNIEPKDFDVATSATPEQVRAEFRNARIIGRRFKLVHIHFGREIIEVATFRA
NHPQDEEEEDSNQSSRNESGRILRDNVYGTLEEDAQRRDFTINALYYDPVSERVLDYANG
VHDIRNRLIRLIGDPEQRYKEDPVRMLRAVRFAAKLDFGIEKHSTLPIRPLAPMLRDIPS
ARLFEEVLKLFLSGHAEPTFEMLVDLELFEPLFPASSKALEYNPTYTHTLISNALINTDL
RIRQNKPVTPAFLFAALLWPALPAKVLRLQERGMPPIAAMQEAAHELIIEQCQRIAIPKR
FTMPIREIWDMQERLPRRSGKRADLLLDNPRFRAGYDFLLLRETAGEQTDGLGEWWTDYQ
DCNDSQRRDMIRDLGNKPEATGTGPRKRRRSSGAKRKRDAEASGE
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagaagctgttccagtcattccgttccccagtgcgtaaaccgcagcaacacacg
cgcaccacgcctgaagtgctcaatagcagtcagcactcgctgcagcgcagccagttcagc
cgtcatgcggtcaatatcgtcgagcgcctgcaaaacgctggctaccaggcctatctggtc
ggtggttgcgtgcgcgacctgatgctcaacatcgagcccaaggatttcgacgtagcaacc
agcgccacacctgaacaggtgcgtgcagagttccgtaacgcccggatcattggccgccgc
ttcaagctggtccatatccactttggcagggaaatcatcgaagttgcgaccttccgcgcc
aatcatcctcaggacgaggaagaagaggacagcaaccagtcctcgcgcaatgaaagcggc
cgcatcctgcgtgacaacgtctatggcacgctggaagaagacgcccagcgccgggacttc
acgatcaacgcgctgtattacgatccggtcagcgagcgggtgctcgattacgccaacggc
gtacacgacattcgcaaccgcctgatccgcctgatcggcgaccccgagcagcgttacaag
gaagacccggtgcgcatgctgcgcgccgtgcgtttcgcagccaagctggacttcggtatc
gaaaagcacagcaccctgccgattcgcccgctggcgccgatgctgcgtgatatcccgtcg
gcccgtctgttcgaggaagtgctcaagctgttcctgtccggccacgccgagcccaccttt
gaaatgctggtggatctggagctgttcgagcccctgttcccggccagctccaaggccctg
gaatacaacccgacctacacccataccctgatcagcaatgccttgatcaacaccgacctg
cgcatcaggcagaacaagccggtaacaccggcgttcctgttcgctgctctgctctggcca
gccttgcctgccaaggtgctgcgcctgcaagaacgcggcatgccaccgattgcggccatg
caggaagccgcgcacgagctgatcatcgagcaatgccagcgcatcgccattccaaaacgt
ttcaccatgccgatccgcgagatctgggacatgcaggaacgtctgccacgccgctccggc
aaacgcgccgacctgctgctcgacaatccacgcttccgtgccggttacgacttcctgctg
ctgcgcgaaaccgctggcgagcagaccgacggtctgggcgagtggtggaccgattatcag
gactgcaacgacagccagcgccgcgacatgattcgtgaccttggcaacaagcccgaagcc
accggcacaggccctcgcaagcgtcgtcgcagcagcggtgccaaacgcaaacgggacgcc
gaggcgtccggtgagtaa
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