Pseudomonas lijiangensis: KQP88_04005
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Entry
KQP88_04005 CDS
T08713
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
plij
Pseudomonas lijiangensis
Pathway
plij00550
Peptidoglycan biosynthesis
plij01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KQP88_04005 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
plij01003
]
KQP88_04005 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
plij01011
]
KQP88_04005 (mrcB)
Enzymes [BR:
plij01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
KQP88_04005 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
KQP88_04005 (mrcB)
Glycosyltransferases [BR:
plij01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
KQP88_04005 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
plij01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
KQP88_04005 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
UvrB_inter
Motif
Other DBs
NCBI-ProteinID:
QWU83962
LinkDB
All DBs
Position
916954..919278
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AA seq
774 aa
AA seq
DB search
MTRSRTSRTSKKPAPRGLPKWLGWVLKLSIVGFVALACVAVYLDAVVQEKFSGKRWTIPA
KVYARPLELFVGQKLSRDDFLIELDALGYRRESVANGPGAAAVNGNTVDLNTRGFQFYEG
TDPAQQVRVRFSGDYVADLTSGSTGAKLAVARLEPLMIGGLYPKNLEDRILIKLDQAPPY
LLDALVTVEDRDFYSHLGVSPKSIARAIWVNTSQGQMRQGGSTLTQQLVKNFYLTNERSL
TRKLTEAMMSVLLELHYSKQEILEAYLNEVFVGQDGQRAVHGFGLASQYFFSQPLSELKI
HQVALLVGLVKGPSYYNPRRNPERALERRNLVLDLLEQQGVATAQVVEAAKKMPLGVTKT
GSLADSSFPAFLDLVKRQLREDYRDEDLTEEGLRIFTSFDPILQMKSQAAMDDTFKRLAG
RKGSDEVEAAMVVTNPETGEVQALLGSRQAGFAGFNRAIDAVRPIGSLVKPAIYLTALER
PSQYTLTSWVADEPFQVKGADGQVWKPQNYDRKAHGNIFLYQGLAHSYNLSTAKLGLELG
VPNVFKTLAKLGVTREWPAYPSMLLGAGGLSPMEIATMYQTIASGGFNTPMRGIRSVLTA
EGEPLKRYPFQIEQRFDPGAIYLVQNAMQRVMREGTAKSVYSVLPSTLNLAGKTGTSNDS
RDSWFAGFSQDLLAVVWMGRDDNGKTPFTGASGALQVWTSFMRKADPLPLDMAMPDNVVQ
AWVNAQTGQGTDANCPNAVQMPYIRGSEPQPGASCSGSPAPAAEVLDWVKGWLN
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgactcgatctcgcacttctcgtacttccaaaaaaccagctccccgtggccttcccaag
tggttgggctgggtgctgaagctcagtattgtcggttttgtggcgctggcttgcgttgcc
gtttacctggacgctgtggtccaggagaagttttccggcaagcgctggaccattccggcc
aaggtctacgcccggcctctggaattgttcgtcggccagaaactgagccgcgatgacttt
ctcatcgaactcgacgcgctgggctatcgtcgcgaaagcgtggccaacggcccgggcgcg
gctgcagtcaacggcaatacagtcgacctcaatacccgtggcttccagttctacgaaggc
accgatcccgcccagcaggttcgcgtgcgcttttccggcgactatgttgcggacctgacc
tctggcagcaccggtgcaaaactggcggtagcccgtcttgaaccgctgatgatcggcggc
ctgtatccgaaaaacctggaagaccggatcctgatcaagctcgatcaggcaccgccttat
ctgctcgatgccctggtgaccgtcgaagaccgtgacttctatagtcatctcggggtttca
cccaagtccattgcccgtgccatctgggtcaatacctcgcaagggcagatgcgtcagggc
ggcagtacgctgacccagcagttggtcaagaacttctacctgaccaatgagcgcagcctc
acgcgcaaactgaccgaagccatgatgtcggtattgctggaactgcattacagcaagcag
gaaattctcgaggcttacctcaatgaggtgttcgtcggtcaggacggtcagcgtgcggtg
catggtttcggtctggccagccagtacttcttcagccagccattgtcggagctgaagatt
catcaggtggcgttgctggtcggtctggtcaaggggccttcctattacaacccgcgtcgc
aatcccgagcgtgctctggagcgtcgtaatctggttctcgacttgctggagcaacagggc
gttgctactgcgcaagtggtcgaggcggccaagaagatgcctctgggcgtgaccaagacc
ggcagccttgcggacagctcgttcccggcattcctcgatctggtcaagcgtcagttgcgt
gaagactatcgcgacgaagacttgaccgaagaagggctgcgaatcttcaccagtttcgat
ccgatcctgcagatgaagtcccaggcggccatggacgatacgttcaagcgactggccggg
cgcaaagggtcggacgaagtggaagcggccatggtcgtgaccaatcccgagactggcgaa
gtgcaagccttgctgggcagtcgtcaggccggattcgccgggttcaaccgtgccatcgat
gccgtgcggcctatcggctcgctggtcaagccggcgatctatctcaccgcgcttgagcgc
ccgagccagtacaccctgaccagttgggtggccgacgagccgtttcaggtcaagggtgcg
gatggccaggtctggaaaccacagaactacgatcgcaaggcccacgggaatattttcctg
taccaaggtctggcgcattcctacaacctctcgacggccaagctgggccttgagctgggc
gtgcccaacgtattcaagaccctcgccaagctgggtgtgacacgcgagtggccagcgtat
ccttccatgttgctgggtgctggcggcttgagtccgatggaaatcgccaccatgtaccag
acgattgccagcggcggcttcaataccccgatgcgcggtattcgcagcgtgttgacggcc
gagggtgaaccgctcaagcgttacccgttccagatcgagcagcgtttcgatccgggcgcc
atttatctggtgcagaacgcaatgcagcgggtgatgcgcgaagggaccgccaagtcggtc
tacagcgtcctgccatcgaccttgaatctggcgggcaagaccggcaccagtaacgattcg
cgcgacagctggtttgcaggtttcagtcaggatctgctggcagtggtgtggatggggcgt
gacgataacggcaagacaccgttcaccggtgccagtggcgccttgcaggtctggaccagt
ttcatgcgcaaggccgatcctctgccgctggacatggcaatgccggataacgtggtccag
gcctgggtcaatgcccagaccggtcaggggacggatgccaattgcccgaatgccgtacag
atgccgtatattcgcggcagtgaacctcagcccggtgcctcctgtagtggtagcccggca
cccgccgctgaagtgctggactgggtcaagggttggttgaattaa
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