Pseudomonas lijiangensis: KQP88_04320
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Entry
KQP88_04320 CDS
T08713
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
plij
Pseudomonas lijiangensis
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plij03400
]
KQP88_04320 (phrB)
Enzymes [BR:
plij01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
KQP88_04320 (phrB)
DNA repair and recombination proteins [BR:
plij03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
KQP88_04320 (phrB)
Prokaryotic type
KQP88_04320 (phrB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
CAP59_mtransfer
Motif
Other DBs
NCBI-ProteinID:
QWU84015
LinkDB
All DBs
Position
complement(983687..985135)
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AA seq
482 aa
AA seq
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MQLFWLRSDLRVHDNTALAAAMERGPTLAVYLVSPTQWQNHDDAACKVDFWLRNLVELEK
ALAGLNVPLLIREADTWDKAPEVLATLCAEHAVKGVHTNEEYGINESNRDQAVGQTLEKA
GVHFNSYLDQLLFKPGSILTRTGGYFQVYSQFRKVCYARLHEAMPRLINLPKAQQPLSIK
SDSVPDQVEGFATPSKTLRELWPAGEHEARQRLATFSDDQIRYYQSERDFPAKPGTSQLS
AYLAAGVISPRQCLHAALMSNDGEFETGNTGIVTWINELLWREFYKHILVGYPRVSRHRA
FRPETEAVKWRNAPSELAAWQEARTGLPIIDAAMRQLLETGWMHNRLRMVVAMFLTKNLL
IDWREGERFFMRHLIDGDLAANNGGWQWSSSTGTDSAPYFRIFNPLSQSEKFDPEGRFIK
HWLPELASLNKKEVHNPALVGGLFGVANYPSPIVDLSKSRERALAAFKALPHRQPAADAL
HE
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgttttggctgcgtagcgatttgcgcgttcacgacaataccgccctggccgct
gccatggagcggggtccgacgcttgcggtgtatctggtcagtcccactcaatggcagaac
catgacgatgccgcctgcaaggtggatttctggctgcgcaatctggtcgagctggaaaaa
gccctcgccgggctgaatgttccattgctgatccgcgaagccgacacctgggacaaagcc
cctgaagtgctggcaacgctctgtgcggagcatgccgtcaaaggcgtgcacaccaatgaa
gaatacggcatcaatgaaagcaaccgcgatcaggcggtaggccagacgctggaaaaagcc
ggtgtccatttcaacagctatctggatcaactgctgttcaagcctggcagcattctgacc
aggaccggtggctactttcaggtctacagtcagttccgcaaggtctgctatgcacgcctg
cacgaagcgatgccgcgcctcatcaatctgccaaaagcccagcagccgctgtcgatcaaa
agcgattcggtgcccgatcaggtcgaaggttttgccaccccgtccaaaacactgcgcgaa
ctctggcctgctggcgaacacgaagcccgccagcgcctggctaccttcagcgacgatcag
atccgctactaccagagcgaacgggatttccctgcaaagcccggtaccagccagttatcg
gcctacctcgcagccggtgtgatttcaccccgccaatgcctgcacgccgcactgatgagc
aatgacggagagttcgagaccggaaacaccggaatagtgacctggatcaatgaactgttg
tggcgggagttctataaacacattcttgtgggctaccctcgtgtttcaaggcatcgcgca
tttcgcccggaaaccgaagccgtcaaatggcgtaatgctccaagcgaactggccgcgtgg
caggaagcccgcaccggtttgcccatcatcgatgctgccatgcgccagttgctggaaaca
ggctggatgcataaccgactaaggatggtcgttgcaatgttcctcaccaagaacctgctg
atcgactggcgcgagggcgagcgctttttcatgcgccacctgatcgacggggatctggca
gccaataacggcggctggcagtggagctcatccacaggcaccgactcggccccttatttc
cgcatcttcaatccactgtcgcaatcggaaaaattcgatcctgaagggcgtttcatcaag
cactggttgccggaactggccagcctcaacaagaaagaggtgcataacccggcgcttgtg
ggcgggctgttcggtgtcgccaactatccgtccccgattgtcgacctgagcaagagccgc
gagcgggccctggccgcgttcaaggccctgccccatcgccagcctgcagcggatgcgctc
catgagtga
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integrated database retrieval system
