Pseudomonas lijiangensis: KQP88_04960
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Entry
KQP88_04960 CDS
T08713
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
plij
Pseudomonas lijiangensis
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plij03032
]
KQP88_04960
03036 Chromosome and associated proteins [BR:
plij03036
]
KQP88_04960
03400 DNA repair and recombination proteins [BR:
plij03400
]
KQP88_04960
DNA replication proteins [BR:
plij03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KQP88_04960
Chromosome and associated proteins [BR:
plij03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
KQP88_04960
DNA repair and recombination proteins [BR:
plij03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
KQP88_04960
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
SSPI
HTH_IclR
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
QWU84132
LinkDB
All DBs
Position
1128526..1128807
Genome browser
AA seq
93 aa
AA seq
DB search
MALTKDQLIADIAEAIDAPKTTARNALEQLGQIVADQLENGVEITLPGIGKLKVAERPAR
TGRNPSTGAAIEIAAKKVIKFVPAKVLNDSINK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atggctcttaccaaagaccaattgatcgccgatatcgctgaagctatcgacgcgccaaaa
accaccgcgcgtaatgctcttgagcagttgggccaaatcgttgccgaccaactggaaaac
ggcgttgaaatcaccttgccaggtatcggcaagctgaaagttgctgagcgtccagctcgc
accggccgcaacccttcgactggcgctgccatcgaaatcgctgccaagaaagtcatcaag
ttcgtaccggccaaagtgctgaacgactcgatcaacaagtaa
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