Pseudomonas lijiangensis: KQP88_04965
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Entry
KQP88_04965 CDS
T08713
Symbol
rlmF
Name
(GenBank) 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF
KO
K06970
23S rRNA (adenine1618-N6)-methyltransferase [EC:
2.1.1.181
]
Organism
plij
Pseudomonas lijiangensis
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plij03009
]
KQP88_04965 (rlmF)
Enzymes [BR:
plij01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.181 23S rRNA (adenine1618-N6)-methyltransferase
KQP88_04965 (rlmF)
Ribosome biogenesis [BR:
plij03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KQP88_04965 (rlmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_10
MTS
UPF0020
Methyltransf_31
Methyltransf_12
PrmA
Motif
Other DBs
NCBI-ProteinID:
QWU84133
UniProt:
A0ABX8HXD3
LinkDB
All DBs
Position
complement(1128966..1129928)
Genome browser
AA seq
320 aa
AA seq
DB search
MTTPHKPPRKKPQRPAKPAEPREKATLHPRNRHQGRYDFPRLINSSPELAEFVILNPYGK
ESIDFANPVAVRVFNRALLKSLYGIAHWDIPADYLCPPIPGRADYLHFLADLLASENNGE
IPRGASIKALDIGTGANCIYPLLGHSDYGWHFVGSDIDSTAIAAATTIIKANGLSKAISV
RQQTNRKHILLGLLDSSERFEVSLCNPPFHSSLEEAQRGSQRKWRALGKADPKRKLPVLN
FGGQSQELWCEGGEIGFVTQLIHESAQIPTQVRWFSTLVSKASNLPAIQAALTRAGVLKS
RVVEMGQGQKQSRFVAWTFM
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgactacgccacacaagcctccccgcaaaaagcctcaacgtcccgccaaaccggcagaa
ccccgcgagaaggccacgctgcatccgcgcaatcgccatcagggtcgctacgacttcccc
aggctgatcaacagcagcccggaactggccgagttcgtgattctcaatccctacgggaag
gaaagcatcgacttcgccaaccctgtggccgtgcgcgtgttcaaccgggcgctgctcaag
tcgctgtacggcatcgcccactgggatattccggccgactacctgtgcccgccgattccg
ggccgtgcggactacctgcattttctcgccgacctgctggccagcgagaacaatggcgag
attccacgcggcgcgtcgatcaaggccctggacatcggcaccggtgccaactgcatctac
cccttgctgggccatagcgactacggctggcacttcgtaggctcggatatcgacagcacc
gccatcgccgccgccacgaccatcatcaaggccaatggcttgagcaaggccatcagcgtg
cgtcagcagaccaatcgcaagcacatcctgctgggcctgctcgacagcagcgaacgcttc
gaggtgagcctgtgcaacccgcccttccactcctcactggaagaagcgcagcgcggcagc
cagcgtaaatggcgcgcactgggcaaggctgaccccaagcgcaagctgccggtgctcaat
ttcggcgggcaatcccaggaactgtggtgtgaaggtggcgagatcggcttcgtgacccag
ttgatccacgaaagcgcccagataccgactcaggtgcgctggttcagcacactggtatcc
aaggcctcgaacctgcctgccattcaggctgcgctgacacgagccggcgtgctgaagagc
cgggtcgtggaaatgggccagggccagaagcaaagccgctttgtggcctggaccttcatg
taa
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