Pseudomonas lijiangensis: KQP88_05025
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Entry
KQP88_05025 CDS
T08713
Name
(GenBank) sigma-54-dependent transcriptional regulator
KO
K03721
transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
Organism
plij
Pseudomonas lijiangensis
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plij03000
]
KQP88_05025
Transcription factors [BR:
plij03000
]
Prokaryotic type
Other transcription factors
Others
KQP88_05025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_50
AAA_5
PAS
PAS_8
AAA_2
Mg_chelatase
HTH_38
ACT
AAA
PAS_4
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QWU84145
LinkDB
All DBs
Position
complement(1144174..1145676)
Genome browser
AA seq
500 aa
AA seq
DB search
MRIHVCFIDRVGITQEVLAILGGRNLNLDAVEMVPPNVYIDAPTLSHQMLEELKDALFRV
RGVEAITVVDILPGQRRHLQLDALLAAMTDPVLALDSAGHVLLANPALIALIGREPEGEP
IGELFADPSLQATLLENGFRLPMREVTLNGEALLLDATPITEAGALLTLYLPSRIGERLS
ALHHDHAEGFDALLGESPAIRILKARAQRVAALDAPLLIQGETGTGKELVARACHASSAR
HGEPFLALNCAALPENLAESELFGYAPGAFTGAQRGGKPGLMELANQGTVFLDEIGEMSP
YLQAKLLRFLNDGSFRRVGGDREVRVNVRILSATHRDLEKMVSEGTFREDLFYRLNVLNL
EVPPLRERGQDILLLARYFMEQACTQIQRPVCRLATSTYPALLGNRWPGNVRQLQNVIFR
AAAISESTVVDIGDLDIAGTAVARQNDGEVGSLEQAVEDFERELLQKLYADHPSTRQLAA
RLNTSHTAIAHRLRKYGIGK
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatccatgtctgcttcatcgaccgcgtcggtatcacccaggaagtactggccatc
ctgggtggacgcaatctgaatctcgatgccgtggagatggtgcctcccaacgtttacatc
gatgcgccgaccctgagccatcagatgctcgaagagctcaaggatgcgttgttccgggtg
cgtggcgtcgaagcgatcaccgtagtcgatatcctccccggccaacgccgccacctgcaa
ctcgatgccctgctcgccgccatgaccgacccggtgctggcgctggacagtgccgggcac
gtgttgctggccaacccggcgctgattgccctgatcggccgagaacccgaaggcgaaccc
ataggcgaactgttcgccgatccgagcctgcaggccacgctgctggaaaacggttttcgc
ctgcccatgcgcgaagtcacgctcaatggcgaagccctgctgctggatgccacgcccatc
accgaagccggtgccctgctgacgctgtacctgcccagccggatcggcgaacgcttgtcg
gccctgcatcacgaccatgccgaaggcttcgatgcgctgctgggggaatcgcccgcgatc
cgcatcctcaaggcccgcgcccagcgagttgccgcactggatgcgcccctgctgattcag
ggcgaaaccggcaccggcaaggaactggtcgcccgtgcctgtcacgccagcagcgctcgc
catggtgagccctttctggcgctcaactgtgcggcgctcccggaaaacctggctgaaagc
gaactgttcggctatgcgcccggcgcgttcaccggcgcccagcgtggcggcaaaccaggg
ctgatggagctggccaaccagggcaccgtgtttctggatgaaatcggcgaaatgtcgccg
tacctgcaagccaaactgctgcgctttctcaacgatggcagcttcaggcgagtgggcggg
gaccgggaagtcagggtcaacgtgcgcatcctcagcgccacccatcgtgatctggaaaag
atggtcagcgaaggcaccttccgggaagacctgttctatcgcctgaatgtgctgaacctg
gaagtcccgccactgcgcgagcgcggtcaggacattctgctgctggcccgctatttcatg
gaacaggcctgcacccagatccagcgaccggtatgccgcctggcaaccagcacctatccg
gctctgctgggcaaccgctggccgggcaatgtgcgtcagttgcagaacgtgatattccgc
gccgcggccatcagtgaaagcacagtggtggatatcggcgatctggatattgcaggcacc
gctgtggctcgccagaacgatggcgaagtcggcagccttgagcaggccgtcgaggatttc
gagcgcgagctattgcagaagctctatgccgatcacccctcgacccggcaactggcggca
cggctgaacacctcacataccgccattgcgcaccggttgcgcaagtatgggattggtaag
tag
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