Pseudomonas lijiangensis: KQP88_05615
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Entry
KQP88_05615 CDS
T08713
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
plij
Pseudomonas lijiangensis
Pathway
plij03420
Nucleotide excision repair
plij03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KQP88_05615
03430 Mismatch repair
KQP88_05615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plij03400
]
KQP88_05615
Enzymes [BR:
plij01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KQP88_05615
DNA repair and recombination proteins [BR:
plij03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KQP88_05615
MMR (mismatch excision repair)
Other MMR factors
KQP88_05615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QWU84257
LinkDB
All DBs
Position
1280163..1281917
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AA seq
584 aa
AA seq
DB search
MPDNHESPADRAGREALERMFACLDEGLSFRLEAGAGAGKTYSLEKALSRLIEHRGPALI
RERQQVACITYTNVAKDEIISRFQAHPAIRAETVHGFCWSLLRDFQTSLRGFLGAEAFWR
ERFEPVGGVGNRRIHYEMGIPRVSEDEVSIRHEDVLTLMVQALPSPKFRAVLTSRYPILF
VDEYQDTDEHFVGALKSWFLDRGEGPMIGLFGDHWQKIYDGGCGLVVHDALQPIEKNANF
RSASRIVDVLNEMRPGLHQEVSDPDLIGEARVFHTNLWPGERRTGSGGGHWTGDTSPEAA
SAYFEYLKAQLSVEGWDFSPKTTKILILNHKGIAREQGYSSIREIYGQYNDPWLKKEDPH
IKYLADQLEPACVAYQKRRYGAMFGHLASDRPTIRRHSDKVAWAEAMDALLELRLTGTIG
EVIDYIIAVPQMQLPNAVLRNEQGLQAAGVEPGEDEPRRITQLRKLRAVSYTELIALDQF
IDGHTPFATKHGVKGAEFENVIVVLGRGWNQYNFAEMLEWFQPGPPANRREKFESNRNLF
YVACSRPKVRLALLFTQLLSQAALAQITAWFGAEHVFELPANPG
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacaatcacgaaagtcccgcggacagagcagggcgagaagcgctggaacgcatg
ttcgcttgtttggatgaaggtctaagctttcgcctggaagcaggtgctggggctggtaag
acctattcgctagagaaggcgctcagtcgattgattgaacaccgaggtcctgcgttgatc
cgggagcgtcagcaagtcgcttgtatcacttacaccaatgtggcgaaagacgagatcatc
tctcgcttccaagcgcatcctgcaatccgagccgagaccgtccatggcttttgctggtcg
ttgctcagagattttcaaacatcactgagaggatttcttggcgctgaagctttttggcga
gagcgttttgagccggtgggtggcgtaggtaacaggcgcatccattacgaaatgggtatt
ccacgcgtatcggaggacgaggtctcgattcggcacgaagatgtcctgacattgatggtt
caggcgcttccgtctccgaagttcagggccgtattgacttcccgatacccgatcctgttt
gtcgacgaatatcaggacacggatgaacattttgtcggtgcactgaagtcgtggtttcta
gatcgcggtgagggaccgatgattggcctatttggtgaccattggcaaaaaatctacgac
gggggctgcggcctagtcgtgcatgacgcccttcagccgatcgaaaaaaatgcgaatttc
cgctcagcatcgcggattgtcgatgtgctgaatgagatgcggccaggcctgcaccaggaa
gtgagcgatcctgacttgatcggtgaagcccgagtgttccacaccaacctctggcctgga
gagcgacggacaggaagcgggggaggacactggactggcgacaccagtcctgaggctgct
agtgcctacttcgaatacttgaaagctcagctcagcgtggaaggatgggatttctctccg
aaaacgaccaaaatcctcatcctgaatcacaaaggcattgctcgtgagcaggggtactcc
tcgatccgtgaaatttatgggcagtacaatgatccgtggctgaagaaggaagatcctcac
atcaagtatttggcagatcagcttgagccagcgtgtgtcgcataccaaaagcgccgatac
ggtgcgatgttcgggcacctggcaagcgatcggccaacgattcgaaggcacagcgataaa
gtcgcttgggctgaggcaatggatgcactcctcgaactgaggttgaccggtaccatcggc
gaggtgattgactacatcatagccgtgccgcagatgcagctccccaatgctgtgctacgg
aatgagcaagggttacaggccgccggtgttgaaccaggtgaggacgagccacgcaggatt
acccagcttcgaaagctcagggcagtatcttacacagagctgatcgcgctagaccaattc
attgatgggcatacgccgtttgccacaaaacacggggtcaagggagccgaattcgaaaac
gtgatcgttgtgttggggcgcggctggaaccaatataatttcgctgaaatgctcgagtgg
tttcagccggggccaccggcgaacaggcgtgaaaaattcgaaagcaatcggaatctcttc
tacgttgcgtgctctcgacccaaggtccgtttggctctgcttttcactcaactgctgagc
caggcagcgcttgctcagatcaccgcgtggttcggcgctgagcatgtattcgagttgcct
gctaaccctggttga
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