Pseudomonas lijiangensis: KQP88_05970
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Entry
KQP88_05970 CDS
T08713
Name
(GenBank) efflux RND transporter permease subunit
KO
K18303
multidrug efflux pump
Organism
plij
Pseudomonas lijiangensis
Module
plij_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plij02000
]
KQP88_05970
01504 Antimicrobial resistance genes [BR:
plij01504
]
KQP88_05970
Transporters [BR:
plij02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
KQP88_05970
Antimicrobial resistance genes [BR:
plij01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
KQP88_05970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
Motif
Other DBs
NCBI-ProteinID:
QWU84325
LinkDB
All DBs
Position
1362885..1365959
Genome browser
AA seq
1024 aa
AA seq
DB search
MHFNLSEWALRHRQVVLYLMIVLAVVGALSYTKLGQSEDPPFTFKAMVIRTLWPGASAEE
VARQVTDKIEKKLMETGEYERISSFSRPGESTVTFIARDSIFSAAVPELWYQLRKKIGDI
RQTLPQGVQGPFFNDEFGTTFGNIYALSGEGFDYAVLKDYAERIQIRLQRVKDVGKVELI
GLQDEKIWIELSNVKLATLGLPMEAVQQALEAQNAVSSASFFETPAERIQLRVSGRFQSV
DEIRNFPIRVGDRTLRISDLAEVHRGFNDPPAPRMRFMDEDAIGLAVAMKDGGDILVLGR
ALEGEFARLQNNLPAGMQLRKVSDQPAAVKTGVGEFVQVLAEALIIVLLVSFFSLGVRTG
MVVALAIPLVLAMTFATMYYLGIGLHKISLGALVLALGLLVDDAIIAVEMMAIKMEQGYD
RLKAASFAWTSTAFPMLTGTLITAAGFLPIATALSSTGEYTRSIFQVVTIALIASWIVAV
MFVPYLGDRLLPDLAKIHAAKHGSDAPDPYATPMYKRVRALVGWCVERRKTVIVATVALF
VLSVVMFRFVPQQFFPASGRLELMVDLKLAEGASLQNTTEQVTRLEQMLKDHPGIDNYVA
YVGTGSPRFYLPLDQQLPAPSFAQIVVLTKTIEDREALRSWLITSLNEQFPTLRSRVTRL
ENGPPVGYPVQFRVTGEHIEVVRDLARQVREKVRENPHVSNVHLDWEEPSKVVHLNIDQD
RARALGVTTADLSAFLRNSLTGSSVSQFREDDELIEILLRGTRNEREQLGSLSSLAVPTQ
SGASVALSQVATLEYGFEEGVIWHRNRLPSVTVRADIYGKEQPATLVRQILPTLDPIRAE
LPDGYLLEVGGTVEDSARGQNSVNAGVPLFILVVLTLLMIQLRSFSRMFMVFVTAPLGLI
GVTLFLLIFNQPFGFVAMLGTIALSGMIMRNSVILVDQIEQDIASGQDQWHAIIEATVRR
FRPIVLTALAAVLAMIPLSRSLFFGPMAVAIMGGLIVATALTLLFLPALYAAWFRVKRAD
QLRS
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgcatttcaatctttccgaatgggcgctgcgtcatcgccaggtcgtcctgtacctgatg
attgtgctggcggttgtgggcgcgctttcctacaccaagcttgggcaaagcgaagatcct
cctttcactttcaaggccatggtcattcgtaccctgtggccgggcgccagtgccgaggaa
gtggcgcggcaggtgaccgacaagatcgaaaagaaactgatggagaccggcgagtacgag
cggatttcctcgttctcgcgtcccggtgaatcgaccgtgacgttcattgcccgcgactcg
atcttttcggcggcggtgcccgagctctggtatcagttgcgcaagaagatcggcgatatc
cgccagaccttgccacaaggcgtgcagggtccgtttttcaacgatgagttcggcaccacg
ttcggcaatatctatgcactgagcggcgaagggttcgactatgccgtgctcaaggactat
gccgagcgcatccagatacgtttgcagcgggtcaaggacgtcggcaaggtcgaactgatc
ggcctgcaggacgagaagatctggatcgaactgtcgaacgtcaagctggccaccctcggc
ctgcccatggaggccgtgcagcaggcccttgaggcgcagaacgcggtgtcgtctgccagt
ttctttgaaaccccggccgagcgtatccagttgcgggtcagcgggcgctttcaatcggtg
gacgagattcgcaacttcccgatccgggtcggtgatcgcacattgcgcatcagcgatctg
gccgaagtgcatcgcggcttcaacgatccaccggcaccgcgcatgcgcttcatggatgag
gatgccatcggtctggcggtggccatgaaggacggtggcgacattctggtgctgggccgt
gctcttgagggcgagtttgcccgcctgcagaacaacctgccggccggcatgcaattgcgc
aaggtttccgatcagccagcggcggtgaaaaccggtgtgggcgagttcgttcaggtactg
gccgaggcgctgatcatcgtcttgctggtgagtttcttctcgttgggcgtgcgcaccggg
atggtggttgccctggcgattcccctggtgttggccatgaccttcgccaccatgtattac
ctggggatcggcctgcacaagatttccctcggcgcgttggtgctggcgttgggcttgctg
gtggatgacgcgatcattgccgtggaaatgatggccatcaagatggagcagggctacgac
cggctcaaggcggccagcttcgcctggaccagcacggccttcccgatgctgaccggtacc
ttgattaccgcagccgggttcctgccgattgccactgcgctgtcgagtaccggcgaatac
acccgctcgatctttcaggtcgtgaccattgccctgatcgcttcctggattgtggcggtg
atgtttgtgccttatctgggcgaccgcctgttgccggatctggcgaagattcatgcggcc
aaacatggctctgacgctcccgatccttacgcgacccccatgtacaagcgtgtgcgtgcg
ctggtgggctggtgcgtggagcggcgcaagaccgtgattgtcgccaccgtcgcgcttttt
gtgttgtcggtggtgatgttccgttttgttccgcagcagttcttcccggcatcggggcga
ctggagctgatggtcgatctgaaactggcagaaggcgcgtccctgcaaaacactaccgag
caggtcacccggcttgagcagatgctcaaggatcatccggggatcgataactacgtggct
tatgtgggcaccggttcgccgcgtttctatctgccgctggatcagcaactgcccgcacca
agctttgcccagatcgtggtgctgaccaagaccatcgaagaccgcgaagccctgcgcagt
tggctgatcaccagcctcaacgagcaatttcctaccttgcgctcacgggtgacacgcctg
gaaaacggcccgcccgtggggtatccggtgcaattccgggtgacgggtgagcatattgaa
gtggttcgggatctggcccgtcaggtccgggagaaggtgagggaaaacccgcacgtctcc
aatgtccatctggactgggaagagcccagcaaggtcgtgcatttgaatatcgatcaggac
cgggcgagggcgctgggcgtcaccacggcggatctttcggccttcctgcgaaattccctt
accggttccagcgtcagccagttccgtgaggacgatgaactgatcgaaatcctgctgcgc
ggtacccgcaacgagcgcgagcaactgggttccctgtcgagtctggcggtgcccacgcaa
agcggcgccagcgttgcactgtcgcaggttgcgaccctggagtatggttttgaagagggt
gtcatctggcatcgcaatcgcctgcccagcgtgacggtgcgtgccgatatctatggcaag
gagcaacctgcgaccctggtccggcagatcctgccgacactcgacccgatccgtgccgaa
ctgcctgacggctatctgctggaagtgggcggtacggtggaggattcggctcgcgggcag
aactcggtgaacgccggtgtgccgctgttcatcctggtcgtgctgaccttgctgatgatc
cagctgcgcagtttttcacgcatgttcatggtgttcgtgacggcgcctctggggctgatc
ggtgtgacgctgttcctgctgatcttcaaccagccgttcggcttcgtcgccatgctgggg
accatcgccctgtccgggatgatcatgcgcaattcggtgattctggtggaccagatcgag
caggacatcgccagcgggcaggatcagtggcatgccatcatcgaagccacggtgcgccgt
ttccgtccgatcgtgctgacggcactggccgctgtcctggccatgatcccgctgtcgcgc
agcctgttcttcggcccgatggcagtggcgatcatgggcggactgattgtcgccacggcg
ctgaccttgctgttcctgccagcgctttatgcggcgtggttcagagtgaagcgggccgat
cagttaaggtcataa
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