Pseudomonas lijiangensis: KQP88_06150
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Entry
KQP88_06150 CDS
T08713
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
plij
Pseudomonas lijiangensis
Pathway
plij03030
DNA replication
plij03430
Mismatch repair
plij03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KQP88_06150 (dnaE)
03430 Mismatch repair
KQP88_06150 (dnaE)
03440 Homologous recombination
KQP88_06150 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
plij03032
]
KQP88_06150 (dnaE)
03400 DNA repair and recombination proteins [BR:
plij03400
]
KQP88_06150 (dnaE)
Enzymes [BR:
plij01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KQP88_06150 (dnaE)
DNA replication proteins [BR:
plij03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KQP88_06150 (dnaE)
DNA repair and recombination proteins [BR:
plij03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KQP88_06150 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QWU84359
LinkDB
All DBs
Position
1405177..1408698
Genome browser
AA seq
1173 aa
AA seq
DB search
MPASFVHLRLHTEYSLVDGLVRVKPLIKALTGMNMPAVAVTDQNNMCSLVKFYKAAQGAG
IKPICGADLWLAGKDEDAPLSRISLLVMNPQGYRNLTELISRGFIEGQRNGLIIVEREWI
AEANEGLIALSAAKEGEIGMALLGGNPGEADELLREWMAIFPDRFYIELQRTNRTNDEEH
LHAAVALADRHGAPLVATNDVRFIKQTDFEAHETRVCIGEGRALDDPRRSHNYSDQQYLK
SPEEMAELFSDLPEALENTVEIAKRCNIDVKLGTHFLPNFPIPDGMTIDEYFRKVSFEGL
EERLAVLLPKDTTEDYEAKRQVYVDRLNFELDIIIQMGFPGYFLIVMDFIQWAKNNGVPV
GPGRGSGAGSLVAYVQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDGRDRVIDYV
AEKYGRNAVSQIITFGSMAAKAVVRDVARVQGKSYGLADRLSKMIPFEVGMTLEKAYEQE
EILRDFLKVDEEAAEIWEMALKLEGVVRNVGKHAGGVVIAPTKLTDFSPIYCDEAGDGLV
TQFDKDDVEAAGLVKFDFLGLRTLTIIDWALKTINRDRAKVNEEPLDIAFIPLDDMPTYQ
LLQRAETTAVFQLESRGMKELIKKLKPDCLEDLIALVALFRPGPLQSGMVDDFINRKHGR
AELSYPHVDYQYEGLKPVLAPTYGIILYQEQVMQIAQVMAGYTLGGADMLRRAMGKKKPE
EMAKQRGGFIEGCKTNNIDPDLAGNIFDLVEKFAGYGFNKSHSAAYGLVSYQTAWLKTHY
PAPFMAAVLSADMHNTDKVVTLIEEVRTMKLRLDAPDVNISEFKFTVSDDGRILYGLGAI
KGVGEGPVEAITEARAAGPFKDLFDFCARVDLKRVNKRTLDGLIRSGALDRLGPYFEQEP
KAYQANIDRNRSVLLAALEEAIQAAEQTARSRDSGHSDLFGGLFVEEDADVYANHRKTRE
LSLKDRLRGEKETLGLYLTGHPIDEYEGEIRRFARQRIIDLKPARDTQTIAGLIIALRVM
KNKKGDKMGFITLDDRSARIEASLFAEAFHSAQSLLQTDAMVVVEGEISNDDFSGGLRLR
AKRVMSIEDARTNLAESLRLTVHCDALKGDRLRWLGDLCKRHRGACPITLDYTGPDAKAL
LQFGEEWRIDPADSLIQALRDQFGRENVFLQYR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgccggcttctttcgttcatctacgcctgcacaccgaatactcactggtcgatggtctg
gtccgggtcaaaccactgatcaaggccctcaccggcatgaacatgcctgctgtggcggtg
accgatcagaacaacatgtgttcgctggtcaagttctacaaggcggcccagggcgcaggc
atcaagccgatctgcggtgcagacctgtggctggcaggcaaggacgaagacgccccgctc
agccgtatcagcctgctggtgatgaatccccagggctatcgcaatctgaccgagctgatt
tcccgaggctttatcgaaggccagcgcaacggcttgatcatcgtcgagcgcgagtggatc
gccgaagccaatgaaggactgattgccctgtctgcggccaaggagggcgaaatcggcatg
gccctgctcggcggcaatccgggtgaagccgatgaactgttgcgcgagtggatggcgatt
ttccctgatcgtttctacatcgaattgcagcgcaccaaccggaccaacgatgaagagcat
ctgcatgctgccgttgccctggccgatcgtcatggcgcaccgctggttgcgaccaacgat
gtgcgtttcatcaagcagaccgacttcgaagcgcacgaaacccgcgtatgcatcggtgag
gggcgggcgctggacgacccgcgccgctcccacaactacagcgatcagcagtacctgaaa
agccccgaggaaatggccgagctgttcagcgatctgcccgaggcgctggaaaacaccgtc
gaaattgccaagcgctgcaacatcgacgtcaagctgggcacgcacttcctgcccaacttc
ccgatccccgatggcatgaccatcgatgaatatttccgcaaggtatcgttcgaggggctg
gaggaacgtcttgcggttctgctgcccaaggatacgaccgaggattacgaggccaagcgt
caggtctatgtcgaccggctgaatttcgagctggatatcattatccagatggggttcccc
ggttacttcctgatcgttatggactttatccagtgggccaagaacaacggcgtgccggtc
ggcccgggtcgtgggtcgggtgcggggtccctggtggcctatgtgcagaagatcacggac
ctggacccgctggaatacgatctgctgttcgaacgcttcctcaacccggaacgggtatcg
atgcccgacttcgacgtcgacttctgcatggatggtcgcgaccgggtgatcgattatgtg
gccgagaagtatggccgcaatgcggtaagccagatcatcacgttcggttccatggccgcg
aaggctgtggtgcgtgacgtggcgcgggtgcagggcaagtcctacgggctggccgatcga
ctgtcgaaaatgattccgttcgaagtcggcatgaccctggaaaaagcctacgagcaggaa
gagatcctgcgcgatttcctcaaggtcgacgaggaagcggctgaaatctgggaaatggcc
ctcaagcttgaaggggttgtgcgtaacgtcggcaagcacgccgggggcgtggttattgcg
ccgaccaagctgaccgacttctcgccgatctattgcgacgaggcgggcgacggtctggtt
acccagttcgacaaggacgatgtcgaggcagcaggtctggtgaagttcgacttcctgggt
ctgcggaccctgaccatcatcgactgggcgctcaagaccatcaaccgtgaccgcgccaag
gtcaacgaagagcctctggacatcgctttcatcccgctcgacgacatgccgacctaccag
ttgttgcagcgggcagaaaccaccgcggtattccagcttgaatcccgcggcatgaaagag
ctgatcaagaagctcaagcccgactgcctggaagacctgatcgcactggtggccctgttc
cgtccggggcctctgcagtccgggatggtggacgacttcatcaaccgtaagcacggtcgt
gcagagctgtcctatccccacgtcgattaccagtacgaaggcctcaagccggtactggca
ccgacctacggcatcatcctgtatcaggaacaggtgatgcagatcgctcaggtcatggcg
ggttataccctcggcggcgccgacatgctgcgccgtgcgatgggtaagaaaaagcccgag
gaaatggccaagcagcgcggcggtttcatcgaaggctgcaagaccaacaatatcgacccg
gacctggcgggtaacattttcgacctggtggagaaattcgccggttacggcttcaacaag
tcccactccgccgcctacggtctggtgtcctaccagaccgcatggctcaagacccattac
ccggcgccgttcatggcggccgtgttgtctgcggatatgcacaacaccgacaaggtcgtg
accttgatcgaagaagtgcggaccatgaagctgcgcctcgatgcgccggacgtgaacatt
tccgagttcaagttcacggtcagcgacgatggccggattctttacgggctgggcgcgatc
aagggtgtgggtgaggggccggtggaggccattaccgaagcccgtgcagccggtccgttc
aaggacctgttcgatttctgtgcccgcgtcgatctcaagcgggtcaacaagcggaccctg
gacggcctgattcgcagtggcgccctcgatcgtctcggtccttacttcgagcaagagcca
aaagcctatcaggccaatatcgaccgtaaccgttcggtgttgctggcggcgctcgaagag
gcgatccaggccgccgagcagacggcccgcagtcgtgacagcggtcactcggatctgttt
ggtggtctgttcgtcgaagaagatgccgacgtctatgccaaccatcgcaagacccgcgag
ctgagcctcaaggatcggctgcgcggcgagaaggaaaccctcgggttgtacctgaccggg
caccctatcgatgagtacgaaggcgagatccgacgtttcgcccgccagcgaatcatcgac
ctcaagcccgcacgcgatacccagaccatcgccgggctgatcattgccctgcgggtcatg
aagaacaagaagggcgacaagatggggttcattaccctggacgaccgctcggcacgcatt
gaagcttccctgttcgctgaagccttccattcggcgcaatcgcttttgcagaccgatgct
atggtggtagtcgaaggcgaaatcagtaatgacgatttttccggtggcctgcgcctgcgc
gccaagcgggtcatgagtatcgaggatgcacgtaccaacctggcagaaagcctgcgcctg
accgtgcattgcgatgcgctcaagggcgaccggctgcgctggctgggcgatctgtgcaag
cgtcaccggggtgcgtgccctatcacgctggattacacggggcctgatgccaaggcatta
ttgcagtttggcgaggagtggcgaattgatccggcagacagcttgattcaagctctgcgt
gaccagttcggacgtgagaacgtctttctccagtatcgctga
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integrated database retrieval system
