KEGG   Pseudomonas lijiangensis: KQP88_07200
Entry
KQP88_07200       CDS       T08713                                 
Name
(GenBank) AAA family ATPase
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
plij  Pseudomonas lijiangensis
Brite
KEGG Orthology (KO) [BR:plij00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:plij03400]
    KQP88_07200
DNA repair and recombination proteins [BR:plij03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     KQP88_07200
    Archaeal homologous recombinant proteins
     KQP88_07200
SSDB
Motif
Pfam: AAA_23 SbcC_Walker_B AAA_29 AAA_21 SMC_N MMR_HSR1 AAA_22 nSTAND3 cobW RsgA_GTPase
Other DBs
NCBI-ProteinID: QWU84540
LinkDB
Position
complement(1622143..1625787)
AA seq 1214 aa
MKILAIRLKNLASLAGPFELDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR
LSNIGQSKVPDVEGEITTSDPRTLLRRGTGSGYAEVDFVGIDQRRYRARWETNRARDNAA
KKLQASRQTLTDLDSEQILSNQSKREFEQLIEQRLGLNFEQFTRAVMLAQSEFSAFLKAD
DKERSELLEKLTNTAIYSQLGRRAYSKSKEAEEALKALNAQAGNITPLEPEQRAELEQNL
SEAQQQHKAHQAQLRQLELKQQWLTELHRLRDEQLSASESLSSAQQDWDNQQGQRQTLGQ
LERLGPQRHRFARRIVLNAQLTPLAERISQHQAREITLQAQQQQLESARSSAHARLLEAQ
QQQNTAKPLLQQAFESQNTLNHLTQELARIVALQQQADQSCAEGQSQLDGLRNQQQQVAE
RLERIARQLEHSTELAPLAQAWSAWRDRLKSLTLTANRLKHGQDELPALQQRAADADEQL
LQQRSELEVLYREADCEADAVTEQTQILGSLLQDNRKQQRAFEELARLWASQQEIDKQLQ
ALAQQQQDAQQERDQLNAEGIQTRDDLKVAEQTLSVTQQLLERQRLARSASVEELREQLQ
DDQPCPVCGSVEHPWHQPEALLQSLTRHDETEQAGAQKAVDELKEKYNQLREQVGGVIAR
QKELIRQQERLALQQQELAPDLQAHPLGAQLLDRDAAQRDSWLKQQLSQLNEVISRDEQR
QAALLTLQKDAARLQQQVQAAHEASQTAARHVTDQIKQLEADRERLEEELTALATLVSPE
LLDNLRNDASATVMQLEQRVTQRLDQLEQQGEEQEEQRERQQRIEKEQDAQQNRVQRQAE
LAEQVQTLSQQQQASQQVLTELLGSHADAQQWQQALEQAVEQARHAETSASQTLQDVHNQ
LIQLGAELKADQQQLLALEQESRELDGRINEWRSTHQELDDASLESLLTYDDARIDQLRQ
QLNLSEKALEQAKVRLHEREQRLQQHQAQHSDITDNEQLAAALLQIQIECDVSEQHCADL
RARLSEDEQRRNANSELQERIALATGEYQRWARLAALIGSAEGDKFRKIAQAYNLDLLVH
HANAQLRQLVRRYRLKRGGSMLGLLVLDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVGVISHVQEMHERIPVQIKV
RRQGNGLSTIEVGD
NT seq 3645 nt   +upstreamnt  +downstreamnt
atgaaaatcctcgccattcgcctgaaaaacctcgcctctctggccgggccgttcgaactg
gatttcaccgcagagcccctggccagtgccggcctgttcgctatcaccggccccaccggc
gcaggcaagagcaccttgctcgatgccctgtgcctggcgctgttcggggcgattccgcga
ctgagcaatatcggccagtccaaggtcccggacgtggaaggtgaaatcaccaccagcgat
ccgcgcaccctgctgcgccgtggcaccggcagcggctacgccgaagtggattttgtcggc
atcgaccagcgtcgttaccgcgcccgctgggaaaccaaccgcgcccgtgacaacgcggct
aaaaagctgcaggccagccgtcagaccctaaccgatctggacagcgagcaaatcctcagc
aaccagagcaagcgcgaattcgagcaactgatcgaacagcgcctgggcctcaacttcgag
cagttcacccgcgccgtgatgctggctcagagcgagttcagcgccttcctcaaggccgat
gacaaggaacgcagcgaactgctggaaaagctgaccaacaccgccatctacagccagctc
ggacgccgcgcctacagcaagagcaaggaagccgaagaagcgctcaaggccctcaacgcc
caggcgggcaacatcaccccgcttgagcctgagcagcgcgccgaactggaacagaacctc
agcgaagcccagcaacagcacaaggcccatcaggcgcaactgcgacaactggaactcaag
caacaatggctgaccgaactgcatcgcctgcgcgatgaacagctcagcgccagcgaaagc
ctgagcagcgcgcaacaggactgggacaaccagcaaggccagcgccagaccctcggccaa
ctggagcgtctgggcccgcaacgtcatcgcttcgcccgccgcatcgtcctcaatgcccag
ctcacgccgctggccgagcgcattagccagcatcaagcccgggaaatcacgctacaggct
caacagcagcaactggaaagtgcccgcagcagcgcgcacgccagactgctcgaagcccag
cagcaacagaacactgccaaaccattgctgcaacaggcctttgaaagccagaacaccctg
aaccatctgactcaggaactggccaggatcgtcgcgctccagcaacaggctgaccagagt
tgcgcagagggccagagccaactggacggtttgcgcaatcagcagcaacaggtcgctgag
cggctggaacgtatcgcccggcaactggaacacagcaccgaactcgccccgctggcacaa
gcctggagcgcctggcgcgaccggctcaaatccctgacgctgaccgccaatcgcctgaaa
cacgggcaggacgaactacccgctctgcaacaacgtgccgccgatgctgatgagcagttg
ctccagcagcgcagcgagcttgaagtactgtaccgagaggccgattgcgaagcagacgct
gtcaccgagcagacccagattctgggcagcctgttgcaggacaaccgcaagcagcaacgc
gcctttgaggaactggcccgcctgtgggccagccagcaagagatcgataaacaactgcag
gctctcgcacagcagcaacaagacgcccagcaggaacgcgaccagctcaatgccgaaggc
atccagacccgggatgatctgaaagttgccgagcagaccctgagcgtcactcagcaatta
ctggaacgtcagcgtctggcccgcagcgccagtgtcgaagaactgcgcgaacagttgcag
gacgaccagccgtgcccggtgtgcggcagcgtcgaacatccctggcatcagcccgaagca
ttgctgcaaagcctgacccgccacgacgaaaccgaacaggccggcgcccagaaagcggtg
gatgagttaaaggaaaagtacaaccagttgcgcgagcaggtgggcggcgtcattgcccgg
caaaaagaactcattcgccagcaggaaagactcgccctccagcagcaggaactcgccccg
gacctgcaagcccatccactcggcgcacaactgctggaccgtgatgccgcacagcgcgac
agctggctgaagcagcagctcagccagttgaacgaagtcatcagccgtgacgaacagcgt
caggctgcattgctcacgctgcaaaaagacgctgcgcgcctgcaacagcaagtccaggct
gcccatgaagccagccagaccgccgcacggcatgtcactgaccagatcaagcaactggaa
gcagatcgcgagcgcctggaagaagaactgacagcacttgccacactggtatcacccgag
ctgctggacaacctgcgcaacgacgcttcggccaccgtcatgcagcttgaacaacgcgtg
acccagcgtctggaccagctcgaacagcaaggcgaagagcaagaggaacagcgcgaacgc
cagcagcgcatcgaaaaggaacaggatgcgcaacagaaccgggtccagcgccaggctgaa
ctggctgaacaggttcagaccctgagtcagcagcaacaggccagccagcaggtgctcact
gagttgctcggctcccatgccgatgcccagcagtggcaacaagcgctggagcaggccgtc
gaacaggcccgacacgccgaaacatcggcaagccagacgttgcaggatgtccacaatcaa
ctgattcagctcggcgccgaactcaaggccgatcaacagcagttgctggctctggagcag
gagtcccgcgaactcgacggccggatcaacgagtggcgcagcacccatcaggaactggat
gacgcttcgcttgaaagcctgctgacttacgacgatgcccgcatcgatcagttgcgccag
caattgaatctcagcgaaaaggccctggagcaagccaaggtgcgactgcatgagcgcgaa
cagcgcctgcaacagcatcaggcgcaacacagcgacatcaccgataacgaacaattggcc
gctgccctgctccagattcagattgaatgtgacgtcagcgaacaacactgcgccgacctg
cgcgcccggctgagcgaagacgaacagcgacgcaatgccaatagcgaattgcaggaacgc
atcgcgctggccacaggcgagtaccaacgctgggcgcgtctggcggcactgatcggttcg
gcggaaggcgacaaattccgcaagatcgcccaggcctacaacctcgacctgctggtccat
cacgccaacgcccagctcaggcaactggtacgccgctatcgcctcaagcgtggcggaagc
atgctgggcctgctggtgctggatacggaaatgggcgacgaactgcgctcggtgcattcg
ttatcgggcggcgaaaccttcctcgtctccctggccctggcactgggactggcgtcgatg
gcatcgagcaccttgcgtatcgaatcgctgttcatcgacgaaggcttcggcagcctggac
cccgaatccctgcaactggccatggacgccctggacggcctgcaagcccaggggcgcaag
gtcggcgtgatctctcacgtacaggaaatgcatgagcggattccggtgcagatcaaggta
cgtcgacaggggaatgggttgagtacgatagaggttggggattga

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