Pseudomonas lijiangensis: KQP88_07200
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Entry
KQP88_07200 CDS
T08713
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
plij
Pseudomonas lijiangensis
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
plij03400
]
KQP88_07200
DNA repair and recombination proteins [BR:
plij03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KQP88_07200
Archaeal homologous recombinant proteins
KQP88_07200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
AAA_21
SMC_N
MMR_HSR1
AAA_22
nSTAND3
cobW
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
QWU84540
LinkDB
All DBs
Position
complement(1622143..1625787)
Genome browser
AA seq
1214 aa
AA seq
DB search
MKILAIRLKNLASLAGPFELDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGAIPR
LSNIGQSKVPDVEGEITTSDPRTLLRRGTGSGYAEVDFVGIDQRRYRARWETNRARDNAA
KKLQASRQTLTDLDSEQILSNQSKREFEQLIEQRLGLNFEQFTRAVMLAQSEFSAFLKAD
DKERSELLEKLTNTAIYSQLGRRAYSKSKEAEEALKALNAQAGNITPLEPEQRAELEQNL
SEAQQQHKAHQAQLRQLELKQQWLTELHRLRDEQLSASESLSSAQQDWDNQQGQRQTLGQ
LERLGPQRHRFARRIVLNAQLTPLAERISQHQAREITLQAQQQQLESARSSAHARLLEAQ
QQQNTAKPLLQQAFESQNTLNHLTQELARIVALQQQADQSCAEGQSQLDGLRNQQQQVAE
RLERIARQLEHSTELAPLAQAWSAWRDRLKSLTLTANRLKHGQDELPALQQRAADADEQL
LQQRSELEVLYREADCEADAVTEQTQILGSLLQDNRKQQRAFEELARLWASQQEIDKQLQ
ALAQQQQDAQQERDQLNAEGIQTRDDLKVAEQTLSVTQQLLERQRLARSASVEELREQLQ
DDQPCPVCGSVEHPWHQPEALLQSLTRHDETEQAGAQKAVDELKEKYNQLREQVGGVIAR
QKELIRQQERLALQQQELAPDLQAHPLGAQLLDRDAAQRDSWLKQQLSQLNEVISRDEQR
QAALLTLQKDAARLQQQVQAAHEASQTAARHVTDQIKQLEADRERLEEELTALATLVSPE
LLDNLRNDASATVMQLEQRVTQRLDQLEQQGEEQEEQRERQQRIEKEQDAQQNRVQRQAE
LAEQVQTLSQQQQASQQVLTELLGSHADAQQWQQALEQAVEQARHAETSASQTLQDVHNQ
LIQLGAELKADQQQLLALEQESRELDGRINEWRSTHQELDDASLESLLTYDDARIDQLRQ
QLNLSEKALEQAKVRLHEREQRLQQHQAQHSDITDNEQLAAALLQIQIECDVSEQHCADL
RARLSEDEQRRNANSELQERIALATGEYQRWARLAALIGSAEGDKFRKIAQAYNLDLLVH
HANAQLRQLVRRYRLKRGGSMLGLLVLDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVGVISHVQEMHERIPVQIKV
RRQGNGLSTIEVGD
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctcgccattcgcctgaaaaacctcgcctctctggccgggccgttcgaactg
gatttcaccgcagagcccctggccagtgccggcctgttcgctatcaccggccccaccggc
gcaggcaagagcaccttgctcgatgccctgtgcctggcgctgttcggggcgattccgcga
ctgagcaatatcggccagtccaaggtcccggacgtggaaggtgaaatcaccaccagcgat
ccgcgcaccctgctgcgccgtggcaccggcagcggctacgccgaagtggattttgtcggc
atcgaccagcgtcgttaccgcgcccgctgggaaaccaaccgcgcccgtgacaacgcggct
aaaaagctgcaggccagccgtcagaccctaaccgatctggacagcgagcaaatcctcagc
aaccagagcaagcgcgaattcgagcaactgatcgaacagcgcctgggcctcaacttcgag
cagttcacccgcgccgtgatgctggctcagagcgagttcagcgccttcctcaaggccgat
gacaaggaacgcagcgaactgctggaaaagctgaccaacaccgccatctacagccagctc
ggacgccgcgcctacagcaagagcaaggaagccgaagaagcgctcaaggccctcaacgcc
caggcgggcaacatcaccccgcttgagcctgagcagcgcgccgaactggaacagaacctc
agcgaagcccagcaacagcacaaggcccatcaggcgcaactgcgacaactggaactcaag
caacaatggctgaccgaactgcatcgcctgcgcgatgaacagctcagcgccagcgaaagc
ctgagcagcgcgcaacaggactgggacaaccagcaaggccagcgccagaccctcggccaa
ctggagcgtctgggcccgcaacgtcatcgcttcgcccgccgcatcgtcctcaatgcccag
ctcacgccgctggccgagcgcattagccagcatcaagcccgggaaatcacgctacaggct
caacagcagcaactggaaagtgcccgcagcagcgcgcacgccagactgctcgaagcccag
cagcaacagaacactgccaaaccattgctgcaacaggcctttgaaagccagaacaccctg
aaccatctgactcaggaactggccaggatcgtcgcgctccagcaacaggctgaccagagt
tgcgcagagggccagagccaactggacggtttgcgcaatcagcagcaacaggtcgctgag
cggctggaacgtatcgcccggcaactggaacacagcaccgaactcgccccgctggcacaa
gcctggagcgcctggcgcgaccggctcaaatccctgacgctgaccgccaatcgcctgaaa
cacgggcaggacgaactacccgctctgcaacaacgtgccgccgatgctgatgagcagttg
ctccagcagcgcagcgagcttgaagtactgtaccgagaggccgattgcgaagcagacgct
gtcaccgagcagacccagattctgggcagcctgttgcaggacaaccgcaagcagcaacgc
gcctttgaggaactggcccgcctgtgggccagccagcaagagatcgataaacaactgcag
gctctcgcacagcagcaacaagacgcccagcaggaacgcgaccagctcaatgccgaaggc
atccagacccgggatgatctgaaagttgccgagcagaccctgagcgtcactcagcaatta
ctggaacgtcagcgtctggcccgcagcgccagtgtcgaagaactgcgcgaacagttgcag
gacgaccagccgtgcccggtgtgcggcagcgtcgaacatccctggcatcagcccgaagca
ttgctgcaaagcctgacccgccacgacgaaaccgaacaggccggcgcccagaaagcggtg
gatgagttaaaggaaaagtacaaccagttgcgcgagcaggtgggcggcgtcattgcccgg
caaaaagaactcattcgccagcaggaaagactcgccctccagcagcaggaactcgccccg
gacctgcaagcccatccactcggcgcacaactgctggaccgtgatgccgcacagcgcgac
agctggctgaagcagcagctcagccagttgaacgaagtcatcagccgtgacgaacagcgt
caggctgcattgctcacgctgcaaaaagacgctgcgcgcctgcaacagcaagtccaggct
gcccatgaagccagccagaccgccgcacggcatgtcactgaccagatcaagcaactggaa
gcagatcgcgagcgcctggaagaagaactgacagcacttgccacactggtatcacccgag
ctgctggacaacctgcgcaacgacgcttcggccaccgtcatgcagcttgaacaacgcgtg
acccagcgtctggaccagctcgaacagcaaggcgaagagcaagaggaacagcgcgaacgc
cagcagcgcatcgaaaaggaacaggatgcgcaacagaaccgggtccagcgccaggctgaa
ctggctgaacaggttcagaccctgagtcagcagcaacaggccagccagcaggtgctcact
gagttgctcggctcccatgccgatgcccagcagtggcaacaagcgctggagcaggccgtc
gaacaggcccgacacgccgaaacatcggcaagccagacgttgcaggatgtccacaatcaa
ctgattcagctcggcgccgaactcaaggccgatcaacagcagttgctggctctggagcag
gagtcccgcgaactcgacggccggatcaacgagtggcgcagcacccatcaggaactggat
gacgcttcgcttgaaagcctgctgacttacgacgatgcccgcatcgatcagttgcgccag
caattgaatctcagcgaaaaggccctggagcaagccaaggtgcgactgcatgagcgcgaa
cagcgcctgcaacagcatcaggcgcaacacagcgacatcaccgataacgaacaattggcc
gctgccctgctccagattcagattgaatgtgacgtcagcgaacaacactgcgccgacctg
cgcgcccggctgagcgaagacgaacagcgacgcaatgccaatagcgaattgcaggaacgc
atcgcgctggccacaggcgagtaccaacgctgggcgcgtctggcggcactgatcggttcg
gcggaaggcgacaaattccgcaagatcgcccaggcctacaacctcgacctgctggtccat
cacgccaacgcccagctcaggcaactggtacgccgctatcgcctcaagcgtggcggaagc
atgctgggcctgctggtgctggatacggaaatgggcgacgaactgcgctcggtgcattcg
ttatcgggcggcgaaaccttcctcgtctccctggccctggcactgggactggcgtcgatg
gcatcgagcaccttgcgtatcgaatcgctgttcatcgacgaaggcttcggcagcctggac
cccgaatccctgcaactggccatggacgccctggacggcctgcaagcccaggggcgcaag
gtcggcgtgatctctcacgtacaggaaatgcatgagcggattccggtgcagatcaaggta
cgtcgacaggggaatgggttgagtacgatagaggttggggattga
DBGET
integrated database retrieval system