Pseudomonas lijiangensis: KQP88_10460
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Entry
KQP88_10460 CDS
T08713
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
plij
Pseudomonas lijiangensis
Pathway
plij02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KQP88_10460
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
plij02000
]
KQP88_10460
Transporters [BR:
plij02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
KQP88_10460
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
DUF2158
SMC_N
AAA_29
TOBE
RsgA_GTPase
MIT_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QWU85151
UniProt:
A0ABX8I1J1
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All DBs
Position
complement(2404269..2405423)
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AA seq
384 aa
AA seq
DB search
MSAVIKDSAQHDPKTLVSLCNLNKHYGDFAAVDNIDLDIQDGEFLTFLGSSGSGKSTTLS
MLAGFETPSSGEILVGGKSLVNVPPHKRDIGMVFQRYSLFPHLSVRDNIAFPLAIRKLPA
AERDKRVDAMLKLVQLEQFAHRRPSQLSGGQQQRVAIARALVYEPRILLMDEPLGALDKK
LREDLQDELRQLHRRLGITIVYVTHDQEEAMRLSQRIAIFSHGKIVGLGTGYDLYQNPPN
AFVASFLGNSNFLKLKAQGNAVATFEGHPLSIRLTSGLKTDQDVLLMIRPEKAQALSTQQ
AEATPLEHGWNEVTAKVTEVLFLGESQTCAVVTSGGTAMTVKALSATGLQLKAGDTVRVR
WATADACIYTQWVDSDLNKAAGAH
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcagtgatcaaagacagcgcacaacacgacccgaaaaccctggtcagcctgtgc
aacctgaacaagcattacggcgatttcgctgcagtggacaatatcgacctggatatccag
gacggcgagttcctgaccttcctgggctccagcggctctggcaagagcaccacactgtcg
atgctggccgggttcgaaacacccagctcgggagaaatcctggtgggtggcaaatccctg
gtgaacgtgccgccccacaagcgggatatcggcatggtgttccagcgttattcgctgttt
cctcacctgtcggtacgcgacaacatcgccttcccgctggccatccgcaaactgccggcg
gccgaacgcgacaagcgcgtggacgccatgctcaagctggtgcaactggaacaattcgcc
catcgccgcccttcgcaactgtccggcggccagcagcaacgtgtggccattgcccgggcg
ctggtttacgaaccacgcattctgttgatggatgaacctctgggcgcgctggacaagaaa
ctgcgtgaagacctgcaggatgaactgcggcagttgcatcgtcgcctgggtatcaccatc
gtctacgtgacccacgaccaggaagaagccatgcgcctgtctcaacgcatcgcgatcttc
agccacggcaagatcgtcggcctgggcaccggctatgacctctatcagaacccgcccaat
gcctttgtcgcctcgttcctgggcaactcgaacttcctgaagctcaaggcacagggcaat
gcggtggcgacgtttgaaggccatccgctgtcgatccggctgacttcaggcctgaaaacc
gatcaggatgtgttgctgatgatccgtccggagaaagcccaggccctgagcactcaacag
gccgaagccactccgctggagcatggctggaacgaagtcacggccaaggtgacggaagtc
ttgttcctgggcgaaagccagacctgcgcagtcgtcacttcaggcggtaccgccatgacc
gtcaaggccctgtcagccaccggcctgcaactgaaagccggtgataccgtccgcgttcgc
tgggccacagccgatgcctgcatctacacccaatgggtcgacagcgacctgaacaaggcg
gctggggcacactga
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