Pseudomonas lijiangensis: KQP88_11515
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Entry
KQP88_11515 CDS
T08713
Symbol
tssC
Name
(GenBank) type VI secretion system contractile sheath large subunit
KO
K11900
type VI secretion system protein ImpC
Organism
plij
Pseudomonas lijiangensis
Pathway
plij02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
KQP88_11515 (tssC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
plij02044
]
KQP88_11515 (tssC)
Secretion system [BR:
plij02044
]
Type VI secretion system
Imp/Vas secretion system core components
KQP88_11515 (tssC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
VipB_2
Motif
Other DBs
NCBI-ProteinID:
QWU85347
UniProt:
A0ABX8HZJ6
LinkDB
All DBs
Position
2645120..2646595
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AA seq
491 aa
AA seq
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MSAEALRSENDNAVEYGVLDRIIAETRLAPGDEAYDIAKRGVAAFIEELLKPHNSQEPVK
KALVDRMIAEIDTRLSQQMDEILHHEDFQALEASWRGLQLLVDRTDFRENIKIEILNVSR
QDLLDDFEDSPEIMQSGLYKHVYTAEYGQFGGNPVGAIIANYFFSPSSPDVKTLQYVSSV
ACMAHAPFIAAAGPGFFGLEQFTGLPDLKDLKDHFDGPQFAKWQSFRQQEDARYCALTVP
RFLLRNPYDPQENPVKTFVYRENVSGSHEHYLWGNTAYAFATRLTDSFARFRWCPNIIGP
QSGGAVEDLPLHHFQSMGEIETKIPTEVLISDRREYELAEEGFIALTMRKGSDNAAFFSA
SSVQKPKFFGISAEGKTAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLEL
ELNKWIGQYVADQENPSADVRGRRPLRAAQITVSDVEGEPGWYRVSLNVRPHFKYMGADF
TLSLVGKLDKE
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgaagcgctacggtcagaaaatgacaacgctgtcgagtatggggttcttgac
cggattatcgccgaaacaagactggcccccggtgacgaagcttatgatattgccaaacgc
ggagtggcggctttcattgaggaactgctgaaaccacacaacagccaggagcccgttaaa
aaggcattggtcgatcgcatgatcgccgagatcgatacacggcttagccagcaaatggat
gagattctgcatcacgaggactttcaggcactggaagcctcatggcgcggtctgcaattg
ctggttgatcgcacggattttcgtgaaaatatcaaaatcgaaatattgaatgtatcccgg
caagacttgctggatgattttgaagactcgccagaaatcatgcagtcaggcctttataag
catgtctacaccgccgaatatgggcagttcggtggtaatcccgttggtgcaatcatcgcc
aactactttttttcgccaagttcgcctgacgtgaaaaccctgcagtatgtatcgagcgtt
gcctgcatggcccatgcgccattcattgctgctgccggtcctggcttctttggtcttgag
caatttacaggcttgcctgatctcaaggacctgaaagatcacttcgatggtccgcaattc
gccaagtggcaaagttttcgccagcaggaagatgctcgttactgtgccctgactgtgcct
cgttttctcctgcgtaacccctatgacccgcaagagaacccggtcaagacgtttgtctac
agggaaaacgtttccggcagccatgagcattacttatggggcaatacggcctacgcattt
gctacccgcctgaccgacagttttgccaggtttcgctggtgtccgaacatcatcggccct
cagagtggcggtgctgtcgaggatctgccgctgcaccatttccagagcatgggtgagatc
gaaaccaagatccctaccgaggtgctgatttccgatcgccgtgagtacgagcttgccgaa
gagggtttcattgcactgaccatgcgcaagggcagtgataacgccgcttttttctccgcc
agctctgtgcagaaacccaagtttttcggcatcagcgccgaagggaagacggccgagttg
aactacaagctcggcacccaactgccgtacatgatgatcgtcaaccgcttggcgcattac
ctcaaagtgctgcagcgtgaacagcttggttcctggaaggagcgtaccgatcttgagctt
gaactgaacaagtggattggtcagtacgtggccgatcaggaaaacccgagcgctgatgtg
cgtggcaggcgtccattgcgtgccgcgcagattaccgtcagtgatgttgaaggtgagccg
ggttggtaccgggtcagcctgaacgtgcgacctcacttcaaatacatgggagcggacttt
acgctttccctggtcggcaagctggacaaggagtaa
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