Pseudomonas lijiangensis: KQP88_11565
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Entry
KQP88_11565 CDS
T08713
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
KO
K11891
type VI secretion system protein ImpL
Organism
plij
Pseudomonas lijiangensis
Pathway
plij02025
Biofilm formation - Pseudomonas aeruginosa
plij03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
KQP88_11565 (tssM)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
KQP88_11565 (tssM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
plij02044
]
KQP88_11565 (tssM)
Secretion system [BR:
plij02044
]
Type VI secretion system
Imp/Vas secretion system core components
KQP88_11565 (tssM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IcmF-related
IcmF-related_N
IcmF_C
IcmF_helical
DUF4131
RsgA_GTPase
SRC-1
AAA_29
PduV-EutP
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QWU85354
LinkDB
All DBs
Position
2657679..2661176
Genome browser
AA seq
1165 aa
AA seq
DB search
MKNLLKKLAALLCKTWVWTLLSVLFVALCIWFAGPLLAVADHKFWESPTSRLLSVSLLFL
LWGLGMVFVSWRSAADRKQKESNTAGQEQLRQQALIEKEHKELSARFKDALRVIRLSSLY
GGEGKHLPWYLLIGPTGSGKTSLLDFSGLDFPLNKVERKLTRDTRGTASSDWYFADQAVI
IDTPGRYLEQGQPPVDASAWLTLLGLLRNRRRTCPVNGVLVTLPVEILSGNDEVRLEMMA
EAVRSRLDELHRQLRVDVPVYLVLTKADSLAGFDEFFDPLSREEGEQVLGATFGQDQRGS
DPDVLRQEFEALLRRIGSQVIMRIHQEYDPQRRGRMLGFPDQLGGIGHRLCLFAEMAFTG
SRYQRATQLRGFYLTRAPHLLSSLQEIGAEEGEHAPINTRALPGMHAGRPRFIRQLLSRV
IFPEAALAMMDKGERQRMSWIRRAAYCAALVVLVLFGALWANGFSANHDRLERIRHLAQQ
WTQQRSGMNAQTDTLAILKSLNLSHEATRVFPGREEVALHERSGLYQGATSNQVLSSAYQ
AELQSQLLPRVARTLEAQIQASMKDREQLLGSLRAYLMLYLPERRDQAWLQDWMAADWAL
RYAGLPREQSELNGHLERLLRQPFKYPVNDALVAQARQALRSESLATIVYRLLREQARSL
ADYRLGQHIGTQASLLAGTEYPIPGFYTRRGYQQFFVTQGVGAVNDILRDNWVLGEGTGL
NGMELRSLMVELEQLYFRDYANHWSEAVAQVALQPFEGPLHGATQAAGMTAANSPLVQLL
TQVRDNTLFPTLAENLEQAAEGASSGVLNAVASAAADQAAALAPKLPDTAKKSLQRRFEP
LHRLLDEHNGPAAELLAVMQALNDVQQQLASLGRSGQPELLAFEMARVRMTGQRDALSNL
RNASARLPQPVGGWFNGLAEATWSWVLGEAYQHINQRYRNELYSFYEQSLDKRYPFHAHS
SSDVAINDFREFFKAQGLAERFFDSYMKPFVSGDPGHYRLRTIDGSGLPASRAYLDQMAR
VHTIRKSFFAENPEEPLVQFKLEPYTLDPAVSRAEFRLGDQVMEYRHGPVVPVSFRWPTD
ADDGRASLVLERMAERPIGIEKTTGPWSLFRLLDLMQTEYLQGRDVLVLKADVGGLRANY
LLLAQRAANPFDVAVLRRFRMPAQL
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacctcttgaagaaactggcagccctgttgtgcaagacatgggtctggacgctg
ctgtcggtattgtttgtggcgctgtgcatctggttcgcggggccgttgctggccgtggcc
gatcacaagttctgggaaagtccgacatcccggctcttgtccgtgagcctgttgtttctg
ctgtgggggctgggcatggttttcgtcagttggcgcagcgcggcagacaggaagcagaag
gagtccaataccgcaggccaggaacagcttcgtcagcaggccctgattgaaaaggaacac
aaggaattatccgctcgcttcaaggacgccttgcgcgtcatcagactctccagcctgtat
ggcggtgaggggaagcacttgccctggtacctgttgatcgggccgaccgggagtggcaag
accagtctgctggacttttccggcctggacttcccgctcaacaaggtcgaacgcaagctg
acccgcgatacccggggtaccgccagcagcgattggtactttgccgatcaggcggtgatc
atcgatacgccgggccgttatctggagcagggtcagcctccggtcgatgccagtgcctgg
ctgacgttgctggggctgctgcgcaatcgtcggcgtacctgtcccgtcaatggtgtgctg
gtgacattgcccgtcgaaatcctgtccggtaacgacgaagtccgtctggaaatgatggcg
gaagcggtgcgcagccgtctggatgagttgcaccgtcagttgcgtgtcgacgtgccggtg
tatctggtgttgaccaaggccgactcgctggcgggattcgatgaatttttcgaccctctg
tccagggaagagggcgagcaggtgctgggcgcaacgttcggccaggatcagcgaggcagt
gatcccgatgtgctcaggcaggaattcgaagcgctgctgcgacgtattggcagtcaggtc
atcatgcgtattcatcaggaatatgacccgcagcgccgtgggcgaatgctcgggtttccc
gatcagcttggggggatcgggcatcgattgtgtctgttcgcggagatggcttttactggc
agtcgctatcagcgtgccactcagttacgaggtttttatttgacccgtgcgcctcacttg
ctctcaagccttcaagagatcggtgcagaggagggtgagcacgccccgatcaacaccaga
gcattgccaggcatgcacgccgggcggccgcgcttcattcgtcagcttttgagtcgggtg
atctttcccgaagcggccctggccatgatggacaagggcgagcgtcagcggatgagctgg
attcgacgcgcagcgtattgtgcggccctggtggtattggtgttgttcggcgcgctctgg
gcgaacggtttcagcgccaatcatgatcgtctggagcgtattcgccacctggctcagcaa
tggacccagcaacgttcgggcatgaatgcccagaccgatactctggcgatactcaagtcc
ctgaacctcagccatgaggccacccgggtctttcccggcagggaagaggtcgcgctgcat
gagcgcagtggcctttatcaaggcgctacaagcaatcaggtgctttcgagtgcctatcag
gctgaactgcaaagccagttgttaccccgtgtagcccgcacactggaagcgcagatacag
gccagcatgaaggatcgtgaacaactgctgggcagcttgcgggcctacttgatgctctac
ttgcccgagcgccgcgaccaggcctggctgcaagactggatggcggctgactgggctttg
cgttatgcaggtctgcccagggaacagagcgagcttaatggccatctggagcgtctgctt
cggcaaccgttcaagtacccggtcaacgatgcattggtggcgcaggctcgtcaggcgctt
cgcagcgagtccctggctactatcgtttatcggctcctgcgcgagcaggcccgcagtctt
gcggactatcgcctgggtcagcatatcgggacccaggccagtctgttggccggtacggag
tacccgattcccggtttctatacccgccgaggctaccaacaattctttgtgactcagggc
gttggtgcggtcaatgacatcctgcgtgacaactgggtgctgggcgaaggcacaggcctg
aacggcatggaactgcgtagcctgatggtcgagctggagcagttgtatttccgtgattac
gccaatcactggagcgaggcggtcgctcaggttgccttgcagccctttgaaggccccctg
cacggggcaactcaggcagccggcatgaccgccgccaattcgccgttggtgcaactgctg
acgcaagtgcgcgataacacgctgtttccgactcttgccgaaaacctggagcaggcagca
gagggcgcgtcttcaggcgtgctgaatgccgtggcttctgcggcagccgatcaggccgcg
gccctggctcccaaactgccggacacggcgaagaagtcattgcagcgccgtttcgagccc
ctgcatcgtttactggacgaacacaacggcccggctgcagaactgctggcggtcatgcag
gccttgaatgacgtgcaacagcaactggccagccttgggcgatccggtcagcccgagcta
ttggctttcgagatggccagagtccgcatgacgggtcagcgggatgcgctgagcaacctt
cgcaatgcatccgcccggttgccccagcctgttggcggatggttcaacgggctggccgaa
gccacatggtcctgggttctgggtgaagcctatcaacacatcaaccagcgttacaggaat
gagctgtacagcttttatgaacagtctctcgataagcgttatccgtttcatgcccatagc
agcagcgatgtggccatcaacgattttcgggagttcttcaaggctcaggggctggcagag
cgctttttcgacagctacatgaagccttttgtcagcggtgatccggggcattatcgcctg
cgcaccattgatggttcaggcttgcctgccagccgtgcctacctcgaccagatggctcgc
gtgcacaccattcgcaaaagcttctttgcagaaaatcccgaggagccactggtgcagttc
aaactggaaccctacacgctggacccggccgtgagccgtgccgagtttcgtctgggcgac
caggtgatggagtatcgccatggtcccgtggtgccggtttcgttcagatggccgaccgat
gcggatgacggtcgcgccagcctggtgctggagcgaatggcagaacggcccatcggtatc
gagaaaactaccgggccatggtcactgttccgcctgctggacctgatgcagaccgaatac
cttcagggccgggatgtgctggtgctcaaggccgatgtaggcgggctgcgggccaattac
ctgttgctcgcccagcgagcggccaaccccttcgatgtcgcggtattgcgcagattccgg
atgccggcacagctttga
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