Pseudomonas lijiangensis: KQP88_12410
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Entry
KQP88_12410 CDS
T08713
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
plij
Pseudomonas lijiangensis
Pathway
plij02025
Biofilm formation - Pseudomonas aeruginosa
plij03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
KQP88_12410 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
KQP88_12410 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
plij02044
]
KQP88_12410 (tssH)
Secretion system [BR:
plij02044
]
Type VI secretion system
Imp/Vas secretion system core components
KQP88_12410 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
ClpB_D2-small
AAA_22
AAA_16
Clp_N
NACHT
AAA_7
TniB
nSTAND3
Sigma54_activat
NBD_SMAX1
AAA_30
AAA_25
AAA_24
Hpr_kinase_C
SLFN-g3_helicase
Relaxase_C
CorA
Motif
Other DBs
NCBI-ProteinID:
QWU80895
LinkDB
All DBs
Position
complement(2943771..2946425)
Genome browser
AA seq
884 aa
AA seq
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MINVDLQQLIQALDAETRRDLERSAERCVARGGSKILVEDLLLGLLERPQGLLARALQDA
EVDAGELSAALQPRVEHSASRNPVFAPELVQWIQDALLVANLELGQNQVEQAALILALLR
NPMRYAGSRYQPLLAKLNVERLKEFALSQKEQPANGKPAVQGESLLERFTHNLTQQARDG
KLDPVLCRDGAIRQMVDILARRRKNNPIVVGEAGVGKTAIVEGLASRIAAGEVPQVLKGV
ELLSLDMGLLQAGASVKGEFERRLKGVIDEVKASPKPIILFIDEAHTLIGAGGNAGGSDA
ANLLKPALARGELRTIAATTWAEYKKYFEKDPALARRFQPVQLHEPTVSEAVTILRGLAQ
VYEKSHGIYLRDDAVVCAAELSARYLAGRQLPDKAVDVLDTACARVRISLAAAPESLERL
RGELAEGGRQRQALRRDAEAGLLIDHEALDALEARLEEAQSEMTALESQWTEQKQLAERL
LELRQQLAKAREAAAVEPTISVEEDAEGTVIETLSNEADEALSVETLEAELNQTHSALTA
AQAKERLVSFEVCPRLVAEVISAWTGVPLSQLAREHNAKVASFAVDLRTRIRGQEQAVHA
LDRSMRATAAGLNKPDAPVGVFLLVGPSGVGKTETALALADLLYGGDRFITTINMSEFQE
KHTVSRLIGAPPGYVGYGEGGMLTEAVRQKPYSVVLLDEVEKADPDVLNLFYQIFDKGVA
NDGEGREIDFRNTLILMTSNLGSDRIAELCENGERPSAEVLEETIRPVLSKHFKPALLAR
MRVVPYYPVGGPVLRELIEIKLGRLGERLNRRQLEFTWCQNLVDHLSERCTQSESGARLI
DHLLDQHVLPLVADRLLDAMATGESLKRVHATLDGNASVTCEFA
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacgtagacctgcaacaacttattcaggcactggacgccgaaacccgtcgtgat
ctggaacgttcggccgagcgctgcgttgcccgtggcggtagcaaaatcctcgtcgaagac
ttgttgctgggcctgctggaacgtccccaaggcttgctcgcgcgcgccttgcaggatgcc
gaagtggatgccggtgaactgagcgctgcgctgcagccgcgcgtcgagcacagtgcttcg
cgtaacccggtgttcgcaccggaactggtgcaatggatacaggatgcgttgctggtggcc
aaccttgaactgggccagaaccaggtcgaacaggccgcgctgatccttgcattgctgcgc
aatccgatgcgctatgccggtagccgctaccagccattgctggccaagttgaacgttgaa
cgcctcaaagagttcgcgctgtcccagaaagaacaaccggccaacggtaaaccggcagtg
cagggcgagtcgctgctggagcgcttcacccacaatctgacccaacaggcccgtgacggc
aaactcgatccggtgctgtgccgcgacggcgctattcgccagatggtcgatatcctggct
cgtcgccgcaagaacaacccgattgtggtcggtgaagcgggtgtgggtaaaaccgccatt
gtcgaaggtctggcttcgcgcatcgccgcgggtgaagtgccgcaagtcctcaagggcgta
gagcttctgtctctggacatgggactgttgcaggccggtgccagcgtcaagggcgagttc
gaacgacgcctcaaaggtgtgatcgacgaagtcaaagcctcgccaaagcccatcatcctg
tttatcgacgaagcccacacgttgatcggtgctggcggcaatgccggtggctccgatgca
gccaacctgctcaagccggccctggcccgtggcgagttgcgtaccatcgctgccaccacc
tgggcggagtacaagaagtactttgaaaaagacccggccctggcccgtcgtttccagccg
gtgcaactgcacgaaccgactgtcagcgaagccgtgaccatcctgcgtggcctggctcag
gtttacgagaagagccacggtatctacctgcgtgatgacgccgtggtgtgtgctgccgag
ttgtctgcccgttatctggcaggccgccagttgccggacaaggctgtcgatgttctcgat
acagcatgcgcccgtgtgcgcatcagcctggccgcggctcctgagagccttgagcgcctg
cgtggcgaactggccgaaggcggccgtcagcgtcaggcgctgcgccgtgatgccgaagcc
ggtctgctgatcgaccatgaagcccttgatgctctggaagcccgactggaggaagcccag
agtgaaatgacagctctggaaagccagtggaccgaacagaagcaactggccgaacgtctg
ctggaactgcgtcagcaactggccaaggcccgtgaagccgcagcggtcgagccgaccatc
agtgtcgaagaggacgccgaaggcacggtcatcgaaaccctgagcaatgaagccgacgaa
gccctgagtgtcgagacgctggaagccgagttgaaccagacccacagtgccttgaccgcc
gctcaggccaaggagcgtctggtcagcttcgaagtctgcccgcgtctggtggccgaagtg
atcagcgcctggaccggtgtgccgctgtcgcaactggcccgtgagcacaatgccaaggtc
gcgagtttcgccgtcgacctgcgtacccgcatccgtggtcaggaacaggctgtacatgcg
cttgatcgttcgatgcgcgccacggctgccggcctgaacaagcccgacgcaccggtgggc
gtgttcctgctggtcggtccgagcggtgtcggcaagaccgaaaccgcgctggccctggcg
gatctgctgtacggcggtgaccgcttcatcaccaccatcaacatgtccgaattccaggag
aaacacaccgtttcacgcctgatcggcgcaccaccgggctatgtaggttacggcgaaggc
ggcatgctcaccgaagccgtgcgccagaagccttattccgtggtgctgctcgatgaagtc
gagaaggctgacccggacgtgctcaacctgttttaccagatcttcgacaagggcgtggcc
aacgacggggaagggcgcgagatcgacttccgcaataccctgatcctgatgacctcgaac
ctgggcagcgaccgtatcgccgagctgtgcgaaaacggcgagcgtccgtctgccgaagtg
ctggaagagaccattcgcccggtcctcagcaaacacttcaaaccggcgctgctggcccgt
atgcgcgtcgtgccgtattacccggtcggcggcccggtgctgcgcgagctgatcgagatc
aaactcggtcgtctgggcgagcgcctgaaccgtcgccagctggagttcacctggtgccag
aacctggtggatcacctgtccgagcgttgcacccagagcgaaagcggtgcgcgcctgatc
gatcacttgctggatcagcacgttctgccgctggtggccgaccgcctcctggatgccatg
gccaccggtgaaagcctcaagcgggttcacgccacgctcgacggcaacgccagcgtgacg
tgcgagttcgcctga
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