Pseudomonas lijiangensis: KQP88_12940
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Entry
KQP88_12940 CDS
T08713
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
plij
Pseudomonas lijiangensis
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
plij03000
]
KQP88_12940
Transcription factors [BR:
plij03000
]
Prokaryotic type
Helix-turn-helix
Other families
KQP88_12940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
GAF
AAA_5
AAA_2
AAA
Mg_chelatase
HTH_50
MCM
PAS_8
Cons_hypoth95
PAS_7
ATPase
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QWU80991
UniProt:
A0ABX8HJT9
LinkDB
All DBs
Position
complement(3157169..3159160)
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AA seq
663 aa
AA seq
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MADHSFLTLPQNELDYITAIGPLALNDGPMLELQQAWRECLAGRVDPHPVVRPVIWASWR
RSIDQGIDPEDAEYRFVTPTDLAEKLSVNALLIETAQEVMRGLLAYNPRGHINLTDPQGT
TLSFCGLDITPVGSRLSESVQGTNCTGLAIAEDRLVYVLAEENFAHGLRQRRMHCAAAPI
RNANGETLAILTLTAEPGWFHFHTLGTVQAAAEAVSRQMALQTLLDEQRSVLEVLNEGLV
VLDDKGCIKALNRYARQLFRVGPELLERPFLQLGQSELNEEIMQRQGEALRDLDCTFQLH
DGTQLACLVSVCLTGQGGRIVSLRENRRIREITRRIMGAQARYTFDSIQGNSRIMQDALR
LGRIASRSDSTTLILGESGTGKELFAQAIHNASERSSGPFVAVNCGAIPRELVQSELFGH
VEGAFTGSARGGSAGKFELADGGTIFLDEIGDMSFDAQVSLLRVLQEGEVTRVGARKSRQ
VDVRIIAATHRNLSQAVAEGAFREDLYYRLNVLNLTVPPLRMRKEDISLLAQHFLDRCAQ
SLRKSVSGISTPALDALMAYSWPGNVRELENTLERATNLAATASIQPGDLPLEIIQASLR
PQPPSRSEYNDAPDLGAHEMNAIIDALKHTNGNIRLAARQLKVSRGGLYNKMNRFGLSAD
AFR
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggccgatcattcgttcctgacactgccccagaatgaactggactacatcaccgccatc
ggcccgctggccctgaacgacgggccgatgctcgaactgcaacaggcctggcgggagtgt
cttgcaggcagagtcgatcctcatcctgtggtgaggccggtgatctgggcttcatggcgg
cgcagcatcgaccaggggatcgatcccgaagatgccgaataccggttcgtcaccccgact
gatctggctgaaaagctgagcgttaacgccttgttgatcgagaccgcccaggaagtgatg
cgcggtctgctcgcctataaccccagaggccatatcaacctcaccgatcctcaaggcacg
accctgagtttctgcgggctggacatcacgccggtgggcagtcgcctgtccgagtccgtg
cagggcaccaactgcacgggccttgcgattgccgaggatcgactggtctacgtgctggcc
gaggagaactttgcccacggtttgcggcaacgtcgcatgcattgcgctgccgcgccgatt
cgcaatgccaatggtgaaaccctggcgatcctgaccctgacagccgagccgggatggttt
catttccataccctgggcaccgtgcaggcggcggctgaggctgtctcgcggcagatggcg
ttgcagacgctgctggacgagcagcgtagcgttctggaggtgctcaatgaaggcctggtg
gttcttgatgacaagggctgtatcaaggcgctcaatcgttatgcccgccagttgttccgg
gtcgggcctgagttgctggagcgtccgttcctgcaactcgggcagagcgagctgaacgaa
gaaatcatgcagcgtcagggcgaagcgttacgggatctggactgtacctttcagcttcac
gacggcactcaactggcgtgcctggtttcggtctgcctgaccgggcagggcgggcggatc
gtgtccctgcgtgaaaaccgccgcatccgcgaaatcacccgccgcatcatgggggctcag
gctcgttataccttcgacagcattcagggaaactccagaatcatgcaggacgcgctacgc
cttggcaggattgcgagtcgcagcgattccaccacgctgatcctcggcgagagcggcacc
ggcaaggagttgttcgcgcaggccattcataatgccagcgagcgtagcagcggtcctttc
gtggccgtcaactgcggcgccattccccgggaactggtgcaaagcgagctgttcggtcac
gttgaaggcgcgtttaccgggtctgcccgtggcggttctgcgggcaagttcgaactggct
gatggcggcaccatctttctcgatgaaatcggcgacatgtcgtttgatgctcaggtcagc
ctgctgcgggttttacaggagggcgaggtgactcgcgtcggcgccagaaagtcccggcag
gtggatgtccggatcattgcagcgacccaccgcaacctgagccaggccgtagctgaaggt
gcgttccgggaagacctctattatcgactcaatgtcctgaacctcacggtgccgccattg
cgaatgcgcaaggaggatatttcccttctggcacagcactttctcgaccgctgcgcgcag
tcattgcgcaagtccgtgtcgggtatttccaccccggcgctggacgcgctcatggcgtat
tcatggccgggaaatgtgcgcgaactggaaaacaccctcgagcgcgctaccaatctggcg
gcaaccgcatcgatccagccaggtgacctgcccctggaaatcatccaggcatcgctacgg
ccgcaacccccgtcacggtctgaatacaatgatgcccctgacctgggagcccatgaaatg
aacgcgatcatcgatgcgctgaagcacaccaacggaaatatccggctggctgcaaggcaa
ctgaaagtgtcccggggcgggctgtataacaaaatgaaccggttcgggcttagcgccgat
gcttttcgttag
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