Pseudomonas lijiangensis: KQP88_15140
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Entry
KQP88_15140 CDS
T08713
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
plij
Pseudomonas lijiangensis
Pathway
plij00071
Fatty acid degradation
plij00280
Valine, leucine and isoleucine degradation
plij00310
Lysine degradation
plij00362
Benzoate degradation
plij00380
Tryptophan metabolism
plij00410
beta-Alanine metabolism
plij00640
Propanoate metabolism
plij00650
Butanoate metabolism
plij00907
Pinene, camphor and geraniol degradation
plij00930
Caprolactam degradation
plij01100
Metabolic pathways
plij01110
Biosynthesis of secondary metabolites
plij01120
Microbial metabolism in diverse environments
plij01200
Carbon metabolism
plij01212
Fatty acid metabolism
Module
plij_M00087
beta-Oxidation
plij_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
KQP88_15140 (fadB)
00650 Butanoate metabolism
KQP88_15140 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
KQP88_15140 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
KQP88_15140 (fadB)
00310 Lysine degradation
KQP88_15140 (fadB)
00380 Tryptophan metabolism
KQP88_15140 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
KQP88_15140 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
KQP88_15140 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
KQP88_15140 (fadB)
00930 Caprolactam degradation
KQP88_15140 (fadB)
Enzymes [BR:
plij01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
KQP88_15140 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
KQP88_15140 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
KQP88_15140 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
KQP88_15140 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
QWU81395
UniProt:
A0ABX8HMW1
LinkDB
All DBs
Position
complement(3702795..3704942)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKALESGIVELNFDLKGESVNKFNRLTLSELRQVVDTLKADASVKGVIVTS
GKDVFIVGADITEFVDNFKLPESELIAGNLEANRIFSDFEDLGVPTVVAINGIALGGGLE
MCLAADYRVIASTAKIGLPEVKLGIYPGFGGTVRLPRIIGADNAIEWIASGKENAAEDAL
KVGAVDAVVVPEKLQAAALDLVKRAISGEFDFKAKRQPKLDKLKLNPIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKTIQKAANFGRDKALEVEAAGFVKMAKTSAAQSLIGLFLNDQEL
KKKAKAYDALAKDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEAIQLGLNEASKL
LGGRVDKGRLTPAKMAEALNAIRPTLSYGDFGNVDLVVEAVVENPKVKQAVLAEVEANVA
ENTILASNTSTISITLLAQALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEEAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDTRSAVDVLYEAKRLGQKNGKGFYAYETDKKGKP
KKVSDPSVLDVLKPIVYEQREVTDEDIINWMMIPLCMETVRCLEDGIVETAAEADMGLIY
GIGFPPFRGGALRYIDSIGVAQFVALADQYAELGALYQPTAKLREMASKGQSFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagtggcatcgtcgaattg
aatttcgacctcaagggtgagtccgtcaacaagttcaatcgcctgaccctgagcgagctg
cgccaggtggttgataccctcaaggccgacgcttctgtcaaaggcgtgattgtcaccagt
ggcaaggacgtattcattgtaggcgccgacatcaccgagtttgtcgataacttcaagttg
ccggaaagcgaactgattgccggtaacctcgaggccaacaggatcttcagcgacttcgaa
gacctgggtgtgcccacggtcgtcgccatcaatggcatcgcactgggcggtggcctggag
atgtgtctggcggctgattatcgcgtcattgccagcacggcgaagatcggtcttcctgag
gtcaagctgggcatttatcccggtttcggcggtactgtccgcctgccacgcatcattggt
gccgacaacgccatcgagtggatcgcttccggcaaggaaaacgctgccgaagacgccctc
aaggtcggtgctgtcgatgcagtggtcgtccctgaaaaacttcaggctgctgccctggat
ctggtcaagcgcgccatcagcggcgagttcgatttcaaggccaagcgtcagcccaagctg
gacaagctcaagctcaatcccattgagcagatgatggcatttgaaaccgccaagggtttt
gtcgcaggtcaagccggcccgaattacccggcacctgtcgaagccatcaagaccatccag
aaagccgcgaacttcggtcgtgacaaggcgctggaagtcgaagctgccggtttcgtgaaa
atggccaagacgtctgcggcgcagagtctgatcggcctgttcctgaacgatcaggagctt
aaaaagaaagccaaggcatacgatgctctggccaaggacgtgaaacaggctgccgtactg
ggcgccgggatcatgggcggcggtatcgcttatcaatcggctgtgaaaggcacgccgatc
ctgatgaaggatatccgcgaagaggccattcaactgggtctcaatgaagcctccaagctg
ctgggtggccgtgtcgacaaaggtcgtctgacacctgccaagatggctgaggcactcaat
gctattcgtcctaccttgtcttatggcgatttcggcaacgtcgatctggtggtcgaagca
gtagtcgaaaaccccaaggtcaagcaggcagtactggccgaagtcgaagccaatgtggct
gaaaacactatcctggcctccaatacctcgaccatttccattaccttgctggctcaggcc
ctcaagcgtccggaaaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtggaagtcatccgtggcgagaagtccagcgaagaagccgtggcgaccaccgttgcc
tacgccaagaaaatgggcaagaacccgattgtggtcaacgactgcccgggcttcctggtc
aaccgtgtcctgttcccgtacttcggcggtttcgccaagcttgtcagcgccggtgtggat
ttcgtgcgcatcgacaaggtcatggagaagttcggctggcccatggggcctgcgtacctg
atggacgtggtcggcatcgacaccggtcaccatggtcgtgacgtcatggccgaaggcttt
ccggaccgcatgaaggacgatacccgttctgccgtggacgttctgtacgaggccaagcgc
cttggccagaagaacggcaagggcttctatgcctacgagacggacaagaagggtaagccc
aagaaggtcagcgatccgagcgtgctggatgtgctcaagccgattgtctacgagcagcgt
gaagtgactgatgaagacatcatcaactggatgatgatcccgctgtgtatggaaaccgtg
cgttgcctggaagacggcatcgtcgaaaccgctgccgaagccgacatgggcctgatctac
ggcatcggtttccctccgttccgtggtggtgcgctgcgttacatcgactccatcggcgtc
gcccaattcgttgccctcgctgaccaatatgccgagctgggtgccttgtatcaaccgacc
gcgaagctgcgcgaaatggccagtaaaggccagagcttcttcggttaa
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