Pseudomonas lijiangensis: KQP88_18405
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Entry
KQP88_18405 CDS
T08713
Name
(GenBank) DEAD/DEAH box helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
plij
Pseudomonas lijiangensis
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
plij03009
]
KQP88_18405
Enzymes [BR:
plij01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KQP88_18405
Ribosome biogenesis [BR:
plij03009
]
Prokaryotic type
rRNA helicases
KQP88_18405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
Abhydrolase_1
Motif
Other DBs
NCBI-ProteinID:
QWU81997
UniProt:
A0ABX8HNN8
LinkDB
All DBs
Position
complement(4410257..4411597)
Genome browser
AA seq
446 aa
AA seq
DB search
MFSEFALHERLLKAVAELKFVEPTPVQAAAIPLALQGRDLRVTAQTGSGKTAAFVLPILN
RLIGPARVRVDIRAVILLPTRELAQQTLKEVERFSQFTFIKAGLITGGEDFKVQAAMLRK
VPDILIGTPGRLLEHLNAGNLDLKLVEVLVLDEADRMLDMGFSEDVERLAGECADRQQTM
LFSATTGGSGLRDMIRKVLKDPQHLQLNNVSELASGTRQQIITADHNVHKEQILNWLLAN
ETYQKAIVFTNTKAMADRLYGRLVAQEYKAFVLHGDKDQKDRKAAIDRLKQGGAKILVAT
DVAARGLDVDGLDLVINFDMPRSGDDYVHRVGRTGRAGTEGLAISLICHGDWNLMSSIER
YLKQSFERRTVKEVKGTYGGPKKVKASGKAVGTKKKKTDTKGDKKKVAAKGPTKRKSVNR
PKSDSLVSKDGMAPLKKRSTPAPAAE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
gtgttttccgaattcgccctgcacgaacgcctgcttaaagctgtggccgagcttaaattt
gtcgagcctacgcctgtgcaggccgccgctattccgctggcattgcaagggcgtgacctg
cgggtgactgcgcaaaccggtagcggcaagaccgcggcttttgtattgccgatcctcaac
cgcctgatcggcccggctcgggtgcgtgtggatatccgcgccgtgatcctgctgccgacc
cgcgagctggctcagcagaccctcaaggaagtcgagcgtttctcgcagttcaccttcatc
aaggccggcctgatcaccggtggcgaagacttcaaggttcaggccgcgatgctgcgcaag
gtgccggacattctgatcggcactccgggtcgtctgctggaacacctcaacgctggcaac
ctggacctcaagctggttgaagtgctggtcctcgacgaagccgaccgcatgctggacatg
ggtttctctgaagacgtcgagcgtctggcgggcgaatgtgccgaccgtcagcagaccatg
ctgttctcggccactaccggtggttcgggcctgcgggacatgatccgcaaagtgctgaaa
gatccacagcacctgcagctcaataacgtcagtgagttggccagcggcacccgtcagcag
atcatcaccgctgaccacaatgtccacaaagagcagatcctcaactggctgctggccaac
gagacttaccagaaagccattgtgttcaccaacaccaaggccatggctgaccgcctgtac
ggacgtctggtcgctcaggaatacaaggcgttcgtgctgcacggcgacaaggaccagaaa
gaccgcaaggcggccatcgaccgtctgaagcagggcggggccaagatcctggtggctacg
gacgtggctgctcgtggtctggatgtggatggtctggatctggtcatcaacttcgacatg
ccacgcagcggcgatgattatgttcaccgcgtgggccgtaccgggcgtgcaggtactgaa
ggtctggcgatctcgctgatctgtcacggtgactggaacctgatgtccagcatcgagcgc
tacctcaagcaaagcttcgagcgtcgcaccgtcaaggaagtcaaaggcacctacggcgga
ccgaagaaggtcaaggcgtcgggcaaggctgtcggcaccaagaagaaaaagaccgatacc
aagggcgacaagaaaaaagttgccgccaaggggccgaccaagcgcaagagcgtcaaccgt
cccaagtcggattcgctggtgagcaaggacggcatggcgccgttgaagaaacgcagtact
ccggcacctgcggctgagtaa
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