Pseudomonas lijiangensis: KQP88_19780
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Entry
KQP88_19780 CDS
T08713
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
plij
Pseudomonas lijiangensis
Pathway
plij03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
plij00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KQP88_19780 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
plij03019
]
KQP88_19780 (groL)
03110 Chaperones and folding catalysts [BR:
plij03110
]
KQP88_19780 (groL)
03029 Mitochondrial biogenesis [BR:
plij03029
]
KQP88_19780 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
plij04147
]
KQP88_19780 (groL)
Enzymes [BR:
plij01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
KQP88_19780 (groL)
Messenger RNA biogenesis [BR:
plij03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
KQP88_19780 (groL)
Chaperones and folding catalysts [BR:
plij03110
]
Heat shock proteins
HSP60 / Chaperonin
KQP88_19780 (groL)
Mitochondrial biogenesis [BR:
plij03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
KQP88_19780 (groL)
Exosome [BR:
plij04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
KQP88_19780 (groL)
Exosomal proteins of other body fluids (saliva and urine)
KQP88_19780 (groL)
Exosomal proteins of breast cancer cells
KQP88_19780 (groL)
Exosomal proteins of colorectal cancer cells
KQP88_19780 (groL)
Exosomal proteins of bladder cancer cells
KQP88_19780 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
QWU82253
LinkDB
All DBs
Position
complement(4741807..4743453)
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKEVKFGDAGRKKMLAGVNVLADAVKATLGPKGRNVIIEKSFGAPLITKDGVSVAKEI
ELKDRFENMGAQLVKDVASRANDDAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI
DKATIAIVAELKKLSKPCTDTKAIAQVGTISANSDNSIGDIIAEAMEKVTKDGVITVEEG
SGLENELSVVEGMQFDRGYLSPYFINKPDTMVAELDSPLILLVDKKISNIREMLPVLEAV
AKAGRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAVLTGGTV
ISEEIGLSLESTTLEHLGNAKRVVLNKENTTIIDGSGVKTEIDSRIAQIRQQIGDTSSDY
DKEKLQERLAKLSGGVAVIKVGAGSEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RSLQAISELKGDNADQNVGIALLRRAVEAPLRQIVANSGDEPSVVVDKVKQGSGNFGYNA
ATGEYGDMIDLGILDPAKVTRSALQAASSIASLMITTEAMIADVPEDKPSAGGGMPDMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagaagttaaattcggcgacgccggtcgcaaaaaaatgctcgctggtgtg
aacgtcctggctgatgcagtaaaagcgaccctgggtccaaaaggccgtaacgtcatcatc
gagaagagcttcggtgctcctctgatcaccaaagacggtgtttcggttgccaaggaaatc
gaactcaaggaccgtttcgagaacatgggcgcgcaactcgtcaaagacgttgcttcccgt
gccaacgacgacgctggtgacggtactaccaccgctaccgttctggctcaggctatcgtc
aacgaaggcctgaaagccgtcgctgccggcatgaatccgatggacctcaagcgcggtatc
gacaaggcgaccatcgccatcgttgccgagctgaagaagctgtccaagccttgcaccgac
accaaggctatcgctcaggtgggtaccatctccgccaactccgataactccatcggcgac
atcattgccgaagccatggaaaaagtgaccaaagacggcgttatcaccgttgaagaaggt
tcgggtctggaaaacgaactgtctgtcgtagaaggcatgcaattcgaccgtggttacctg
tccccgtacttcatcaacaagccggacaccatggttgccgagctggacagcccgctgatc
ctgctggtcgacaagaagatctccaacattcgcgaaatgctgccggttctggaagcagtc
gcaaaagctggccgtcctctgctgatcgttgccgaagacgttgaaggcgaagccctggcg
actctggttgtgaacaacatgcgcggtatcgtgaaagttgcagccgtcaaggctccaggt
ttcggtgaccgtcgcaaggcaatgctgcaggacatcgctgtcctgaccggcggtaccgtt
atctccgaagagatcggcctgagcctggaaagcactaccctggagcacctgggtaatgcc
aagcgcgttgtgctgaacaaagaaaacaccaccatcatcgacggctccggcgtcaagacc
gaaatcgactcgcgcatcgctcagattcgccagcagatcggtgacaccagctccgactac
gacaaggaaaaactgcaagagcgtctggccaagctgtctggcggcgttgcagtgatcaag
gtcggcgccggttccgaagtcgaaatgaaagagaagaaagcccgcgttgaagacgccctg
cacgctacccgtgcagccgttgaagaaggcgtggtacctggcggtggcgttgctctggtt
cgctccctgcaggccatctccgagctgaaaggcgacaacgccgatcagaacgtcggtatc
gctctgctgcgtcgcgctgtagaagctccactgcgtcagatcgttgccaactccggtgac
gagccaagcgttgttgtcgacaaggtcaagcagggttcgggtaacttcggttacaacgct
gctaccggcgaatacggcgacatgatcgacctgggtatcctggacccggccaaagtgact
cgttctgctctgcaggcagcatcctccatcgccagcttgatgatcaccaccgaagcgatg
atcgctgacgtgcctgaagacaagccatcggctggcggcggcatgccagacatgggcggt
atgggtggcatgggcggcatgatgtaa
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